KEGG   Altererythrobacter sp. B11: AEB_P0912
Entry
AEB_P0912         CDS       T05671                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
alb  Altererythrobacter sp. B11
Pathway
alb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:alb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AEB_P0912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alb03021]
    AEB_P0912
   03400 DNA repair and recombination proteins [BR:alb03400]
    AEB_P0912
Enzymes [BR:alb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AEB_P0912
Transcription machinery [BR:alb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AEB_P0912
DNA repair and recombination proteins [BR:alb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AEB_P0912
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Biotin_lipoyl_2 Peptidase_M23 RPOC_hybrid Apocytochr_F_C YqfD
Other DBs
NCBI-ProteinID: BBC71780
UniProt: A0A2Z5YUT2
Position
943844..948175
AA seq 1443 aa
MNELTKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERILYFESYVVTEPGLTPLEKYQLLTEDELLDAQDEYGEDAFTAG
IGAEAVKHMLMDLDLVQERDDLLEELATTKSALKPKKIIKRLKVVESFIDSGNRPEWMIL
EVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGIYYLSMDRDGEPGEGMVLADIAEVHQALHV
GAVTLHTKITSRVPQTDEAGKQYMRRVETTPGRMLIGECLPKNHKVPYEVINRLLTKKDI
GEVIDEVYRHTGQKDTVLFADAIMALGFRHACRAGISFGKDDMIIPDSKQGMIEETKALV
ADYEQQYQEGFITQQEKYNKVIDAWSRCGDQVANAMMDEIRATPKDDSGREAPINSIYMM
SHSGARGSPAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLAD
TALKTANSGYLTRRLVDVSQDCVIVEEDCKTENALEMRAIIQGGSVIASLAERILGRTTA
EDLVNAKTGEVIVKAGTLLDEPMVKAIEEAEVQSAKIRSPLVCEAEQGVCGKCYGRDLAR
GTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQVNETSHLESISDGKVVYRDMPLI
TDKRGRRLSLARNGEMVVVDAQGRERAIHRVPYGTMLMFEDGAAVKEGDRLAEWDPFTLP
IITEQSGVVRYQDLAEGKTMEERVDEATGIAQRVVTEYRASGRSKKEDLRPRLTLLNEAG
DETEAARYMLAPGTTLSVEDGQQVEAGDILARASREAAKTRDITGGLPRVAELFEARIPK
DNAVIAKISGRIEFVRDYKAKRKIAIIPEEGDPVEYLIPKTKVIDVQEGDFVKKGDTLIS
GSPNPHDILEVLGVEALAEYLVAEIQEVYRLQGVKINDKHIEVIVRQMLQKVEITDGGDT
TLLPGEQVDLEEMNEVNSKLSKGKQPAVGTPILLGITKASLQTRSFISAASFQETTRVLT
QAAVEGKKDTLIGLKENVIVGRLIPAGTGAGMNRLRVTATSRDAAIRAQYRKMQEALIAP
NSAAEEHAAELLRDPADDLGDDALASVEGETHGTDADAGDYLIQSDEAAPDATDTTPLED
EEE
NT seq 4332 nt   +upstreamnt  +downstreamnt
atgaacgaactgaccaaattcacgaaccagctcgccaagcccgagaccttcgaccagatc
cagatcggcatcgcgagcccggagcgtatccgcagctggtccttcggcgagatcaagaag
ccggaaaccatcaactaccgcaccttcaagccggagcgtgacggcctgttctgcgcgcgc
atcttcggccccgtgaaggattacgagtgcctgtgcggcaagtacaagcgcatgaagtac
aagggcgtcgtctgcgaaaagtgcggcgtcgaagtgacggtgaccaaggtccgccgcgag
cgcatgggccatatcgagctggccgcgccggtggcgcatatctggttcctcaagagcctg
cccagccgcatcggcctgctgctcgacatgcagctgaagcagcttgagcgcatcctgtac
ttcgaaagctacgtcgtcaccgagccgggcctcacgccgctggagaagtaccagctgctg
accgaggacgaactgctcgacgcgcaggacgaatatggcgaggacgccttcaccgccggc
atcggtgccgaggccgtgaagcacatgctgatggacctcgacctcgtgcaggagcgtgac
gacctgctggaagagctggcgaccaccaagtccgcgctcaagccgaagaagatcatcaag
cggctgaaggtcgtggaaagcttcatcgattccggcaaccgcccggaatggatgatcctg
gaagtcgtgcccgtgatcccgcccgagctgcgcccgctggtgccgctggacggcggccgc
ttcgcgacctcggatctcaacgatctctatcgccgcgtgattaaccgcaacaaccgcctc
aagcgcctgatggagctgcgcgcgcccgacatcatcgtgcgcaacgaaaagcgcatgctg
caggaagccgttgacgcgctgttcgacaacggccgccgcggccgcgtgatcaccggcgcc
aacaagcgtccgctcaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgt
cagaacctgctcggcaagcgcgtcgactattcgggccgttccgtgatcgtgaccggtccg
gagctcaagctgcaccagtgcggcctgccgaagaagatggcgctcgagctgttcaagccg
ttcatctacgcgcgcctcgatgccaagggtctgtccatgaccctgaagcaggcgaagaag
tgggtcgagaaggagcgcaaggaagtctgggacatcctcgacgaggtgatccgcgagcat
ccggtgctgctgaaccgcgcgcccacgctccaccgccttggcatccaggcgttcgagccc
gtcctgatcgaaggcaaggcgatccagctccacccgctggtctgctcggccttcaatgcc
gacttcgacggtgaccagatggccgtgcacgttccgctgagcctcgaggcgcagctggaa
gcgcgcgtgctgatgatgtccaccaacaacatcctcagccccgccaacgggaagccgatc
atcgtgccttcgcaggacatggtgctgggcatctattacctctccatggatcgcgatggc
gagccgggcgagggcatggtgctggccgatatcgccgaagtgcatcaggcgctgcatgtc
ggcgcggtgacgctgcacacgaagatcaccagccgcgtcccgcagacggacgaggccggc
aagcagtacatgcggcgtgtggaaaccaccccgggccgcatgctgatcggcgagtgcctg
ccgaagaaccacaaggtgccctacgaggtcatcaaccgcctgctgaccaagaaggacatc
ggcgaggtgatcgacgaggtctatcgccacaccggccagaaggacacggtgctgttcgcc
gacgccatcatggcgctgggcttccgccacgcgtgccgtgccggcatttccttcggcaag
gacgacatgatcatccccgattccaagcagggcatgatcgaggagaccaaggcactggtt
gccgattacgagcagcagtaccaggaaggcttcatcacccagcaggagaagtacaacaag
gtgatcgacgcgtggagccgttgcggtgaccaggtggcgaacgccatgatggacgagatc
cgcgcgacgccgaaggatgacagcggccgcgaggcaccgatcaactcgatctacatgatg
agccattccggtgcgcgtggttccccggcgcagatgaagcagctggccggcatgcgcggc
ctgatggccaagccgagcggcgagatcatcgaaacgccgatcatctcgaacttcaaggaa
ggcctgaccgtccttgaatacttcaactccacccacggcgcccgcaagggcctggcggac
acggcgctcaagacggcgaactcggggtacctgacccgccgcctggtcgacgtgtcgcag
gattgcgtcatcgtggaagaggactgcaagaccgagaacgcgctggaaatgcgtgcgatc
atccagggcggcagcgtaatcgccagcctggctgagcgcatcctcggccgcaccacggcc
gaagacctggtgaacgccaagacgggcgaagtgatcgtgaaggcgggcacgctgctggac
gaaccgatggtgaaggccatcgaggaagccgaagtgcagtccgccaagatccgcagcccg
ctggtttgcgaggcggagcagggcgtctgcggcaagtgctacgggcgcgatctggcccgc
ggtacgccggtgaacatcggcgaggctgtgggcgtgatcgccgcgcagtccatcggtgag
ccgggcacgcagctgaccatgcgtaccttccacatcggcggtgcggcgcaggtgaacgaa
accagccacctggaaagcatcagcgacggcaaggtcgtctatcgcgacatgccgctcatc
accgacaagcggggccgccgcctgtcgctcgcccgcaacggcgagatggtggtggtcgac
gcccagggccgtgagcgcgcgatccatcgcgtgccttacggcaccatgctgatgttcgag
gacggcgccgcggtgaaggaaggcgatcgcctggccgagtgggatccgttcaccctgccg
atcatcaccgagcagtcgggcgtggtccgttaccaggacctggccgaaggcaagacgatg
gaagagcgggtggacgaagccaccggcatcgcccagcgcgtcgtgaccgaatatcgcgcc
agcggtcgttcgaagaaggaggatctgcgtccgcgcctgaccctgctgaacgaagccggc
gacgagacggaggccgcacgctacatgctggcgccgggcaccaccctgtcggtggaagat
ggccagcaggtggaagcgggcgacatcctggcgcgtgcctcgcgcgaagccgccaagacg
cgcgacatcaccggcggtctgccgcgtgttgccgagctgttcgaggcgcggattccgaag
gacaatgcggtgatcgccaagatcagcggccgcatcgaattcgtccgcgactacaaggcc
aagcgcaagatcgcgatcattccggaagagggtgatcccgtcgagtacctgatccccaag
accaaggtgatcgacgtgcaggaaggcgacttcgtgaagaagggcgatacgctcatctcg
ggaagccccaacccgcatgacattctggaagtgctcggggtggaggctctggccgaatac
ctcgtggcggaaatccaggaagtctatcgactgcagggcgtgaagatcaacgacaagcac
atcgaggtgatcgttcgccagatgctgcagaaggttgagatcaccgatggcggcgacacc
acgctgctgccgggcgaacaggtcgatctggaagagatgaacgaggtgaacagcaagctt
tccaagggcaagcagcctgcggtgggcacgccgatcctcctcggcatcaccaaggccagc
ctgcagacccgcagcttcatctccgccgcgtccttccaggaaaccacccgcgtgctcacg
caggcggccgtggaaggcaagaaggacacgctgatcggtctcaaggagaacgtgatcgtt
ggccgtctcatccccgccggcaccggcgcgggcatgaaccggctgcgcgtcaccgccacc
agccgcgatgcggcgatccgcgcccagtatcgcaagatgcaggaagcgctgatcgcgccg
aattcggctgccgaggagcatgcggccgaactcctccgtgatccggcggacgatctgggc
gacgacgcgctggcttcggtggagggcgagacccacggcaccgatgccgatgcgggcgat
tacctgatccagagcgacgaggctgcgcccgacgccacggacaccacgccgctggaggac
gaggaggaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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