KEGG   Alteromonas sp. Mac1: AV939_11470
Entry
AV939_11470       CDS       T05687                                 
Name
(GenBank) exodeoxyribonuclease V subunit gamma
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
ale  Alteromonas sp. Mac1
Pathway
ale03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ale00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AV939_11470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ale03400]
    AV939_11470
Enzymes [BR:ale01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AV939_11470
DNA repair and recombination proteins [BR:ale03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AV939_11470
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: AMJ87129
Position
complement(2688214..2691834)
AA seq 1206 aa
MLALYPSNKLEHLSFLLTTLIKHQPNGVFTPETILVESPGMQHWVSMQLAKEQGVAMNLD
FPLPVRFMWNTARLVLGKDKVPKQSPYRREVLAWRIDALLLEAAGKETSLQSTAAFEQVN
KYWLQAGSLQEQGVQRLQLATALADVYEQYLLYRPDWLFAWEENQRKTNDESEIWQSEIW
RHLSKQEPLHPARLHQLTLTALNSGDHLESGVSELPNRIVVFAINTMAPQLIAFFDALAA
HIDIHIFHLNPSVNYWGDAKSDSELARQLRMDGLEKWMQTDQSNPLLGNLGQQGRELFNL
LTDLDTFEVSAFDAPIPADSESGEILLLNQIHNDILEALPATPLASIKSTDADLCENTDD
SVTIMCTHSALREVQVLHDHLLHWLSQDASRTPSDVLVMCPAIENYAPFVDTVFHRVGTK
PLGGNGPVRLPCTIADRSPMDAEPLIAAYMTLLHLPDSRFGVSDIVDYLQLDAVQKRFSI
AQDDIDQMTVWLKQAHIHWGLDGSHKANVSAGATHENTYSWWWGIRRLLLGLLAPDSEGI
IDDMLTIPDVEGQSTVTLGKLIHVIELLGRFATELNTPRSPNAWGADLLALRDTCFTPTK
EQEHSWDLIAKVAADLAARCEEAGYTYDLSLRQVRELLLSRFSSPDAGNHFMTGQVTVCS
MLPMRSIPFKKVCILGLNDSEFPRKSTPLGLDLMAGPDRRVGDRSRRLEDRYLFLEAIIS
ARESLYLSYQGNDVKNNSERQPSLVLGEFLDMLDTGYQVNIGHYLKHAPLHPFSESAFTG
ALPSYETGWLRLAQSLRDAVSPAPETESSSIDGNKKGREGGKKGSEIQSSLAPLAVDSTP
ENTSFQCMQVARAFRDPLEFFSQQRLGVNLSQSFTLLDNSEPFETNALVRYQVLDAMFSS
SASFDDANAATLQHSDRVVQFAALRGDIPNNPVAQEELELWKESAVALTQAMGPHDAEPK
RAQFAGNHFTFTASALEGGSSLMQPCAGKVNDIRALGYFMTQLVFSASDDVTPHTQYPLD
IFYCDWIKGETKLMKRTFPAVDKNTARQVLLSIESLFVGILSAPTPVYSSLMSAVVSGTK
KSPGTLLANKVTVPIFLASLEANSKIDAEFEDGAQGGGTQFDSDTEDTEEVGKSLIPDIC
AFFASEDAQRILKNWLQSSGQFTADIASNPYVKWLFPDGVSWHDMPTTQAFLLFALVVNI
SSEEQL
NT seq 3621 nt   +upstreamnt  +downstreamnt
ttgctcgcgctttatccatcgaacaaacttgaacacctcagcttccttcttactacgcta
atcaagcatcaacctaatggcgtttttacccctgaaaccatactagtagaaagcccaggc
atgcaacattgggtaagtatgcaacttgctaaagagcaaggcgtggcgatgaaccttgat
tttccgttaccggttcgctttatgtggaacacggcaaggttagtgttgggtaaagataaa
gtacctaagcagtcgccttaccgacgtgaagtgcttgcatggcgcattgatgcactttta
ctagaagcggcgggaaaagaaacatcgctacaatctacagcagcgttcgagcaggttaat
aaatactggttacaagcgggcagtctgcaagagcaaggtgtacaacgactgcaattggca
accgcattagccgatgtgtacgagcagtatttgttatatcgtccagattggttgtttgcg
tgggaagaaaaccagcgcaaaacgaatgatgagtctgaaatttggcaaagtgaaatatgg
cgtcatctatccaagcaagaacctttgcacccagcaagactgcaccaacttacccttacc
gcgttaaatagcggcgatcatcttgaaagcggcgttagcgaattacccaaccgtattgtg
gtgtttgctattaacaccatggcgccgcagttgattgcttttttcgatgcgttagcggcg
cacatcgatattcatatttttcatttgaaccccagtgttaattattggggcgatgcgaaa
agcgatagcgaactagcaaggcagcttcgcatggacgggctagagaaatggatgcagacg
gatcaaagtaacccgttattaggtaatttgggtcagcagggcagagagcttttcaatttg
ctcaccgatttagacacttttgaagtcagtgccttcgacgcgcccattccagctgatagt
gaaagcggtgaaatcttattactaaaccaaattcataacgatatattagaagcgttaccg
gctacgcctctcgcaagtataaaaagcacagatgcagacctctgtgaaaacactgatgac
agtgtgaccattatgtgtacccattcagcgctacgtgaagtacaggtgctgcacgatcat
ttactgcactggttatcgcaagatgcatcaagaacgccatctgatgtgctggtgatgtgc
cccgcgatagagaactatgccccgtttgtagacacggtatttcatcgggtgggaactaaa
ccgctaggaggcaatgggccagtgcgcttgccatgtactattgccgatagaagccccatg
gatgctgagcctcttattgccgcttacatgacactccttcatttgcctgatagtcgtttt
ggcgtatcagatattgtcgattacttgcaactagatgcggtacaaaaacgctttagtatt
gcacaagatgatattgaccaaatgacagtatggcttaagcaagctcatattcactggggg
ttagacggcagccacaaagccaatgtatcggcaggagccacccatgaaaacacctacagc
tggtggtggggaattaggcgtttattgttaggtctgttagcgccagatagcgaaggtatt
atcgatgacatgttgaccattcccgatgtggaaggtcagtcgacggtaaccctaggtaag
ctaatccatgttatagagctacttggcaggtttgccactgagcttaataccccacgaagc
ccgaatgcgtggggggccgatttattagcactgcgtgatacctgctttaccccaaccaaa
gagcaagaacacagctgggaccttattgctaaagtggccgctgatttggctgctcgatgt
gaagaagcaggttatacctacgatttaagtttacgtcaggtgagggaattactgctaagt
cgtttctcatctcctgatgcaggtaaccactttatgacgggacaagtgacggtatgttcc
atgctgcctatgcgtagtatcccgtttaaaaaagtctgcatattagggcttaacgacagc
gagtttcctcgtaagtctacacccttaggcctcgatttaatggcggggcctgatagaaga
gtaggcgaccgttcccgtcgtttagaagacagatacctctttttagaagcgattatttcg
gccagagaaagcttgtatttaagctaccaaggtaacgatgtaaaaaataacagtgagcgc
caacctagcttagtgttaggtgaatttttggatatgttagacacgggctatcaggtaaac
attggccattatttaaagcatgcgccattacacccgttcagtgaaagcgcgtttaccggc
gcactccccagctatgaaacgggctggttacgcctagcccaatcactacgtgatgctgtt
tcgcctgcccccgaaaccgaaagctctagcattgatggcaacaaaaaaggcagagaaggc
ggtaaaaaaggcagcgaaatacaaagttcactcgcgcctttagcggtagacagcacacct
gaaaacaccagctttcagtgtatgcaggtggcacgcgcgtttcgcgatccactagagttc
ttttcacagcagcgattaggggtaaacttatcccagtcattcaccttactagacaatagc
gaaccttttgaaacaaatgcgctagtacggtatcaagtactcgacgcaatgttttcttca
agtgcttcatttgatgatgcgaatgcggcaactcttcagcacagcgatagagtagtgcaa
ttcgccgcgcttcgtggtgacattcccaataaccctgtagctcaagaagagctagagctg
tggaaggagagcgcggtagcccttacccaagcgatggggcctcatgatgccgaaccgaaa
agagcgcaatttgcaggcaaccactttacctttactgccagtgcgcttgaaggcggaagc
agcttaatgcagccgtgcgcaggtaaggtgaatgatataagagccttaggttactttatg
acccagcttgtgtttagtgcaagcgatgatgtaacaccccatactcaatatccgctagat
atcttttactgcgattggataaaaggtgaaactaagctaatgaagcgcacgtttccagca
gtggacaagaatactgcccgccaagttttgttaagtattgaatcattattcgttggcata
ttaagtgcccctacgccagtgtatagctcattaatgagtgctgtagtaagtggtactaag
aaatcacctggcacccttttggcaaacaaagtcaccgtacccatatttctggctagcctt
gaggctaattcaaaaattgatgctgaatttgaagacggtgctcaaggtggtggtactcaa
tttgatagtgataccgaagatacagaagaagtcggcaagtccctcatacctgatatatgc
gcattttttgccagtgaagatgcccagcgcatacttaaaaattggctacagtcatcgggg
caatttaccgctgatatcgcgagtaacccttatgttaaatggttatttcctgatggcgtg
agttggcatgatatgccaaccacacaggcttttttattgtttgctttggtcgttaacatt
tcatcagaggagcagttatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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