KEGG   Alteromonas sp. Mac1: AV939_19935
Entry
AV939_19935       CDS       T05687                                 
Symbol
trmE
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
ale  Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:ale00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ale03016]
    AV939_19935 (trmE)
Transfer RNA biogenesis [BR:ale03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    AV939_19935 (trmE)
 Prokaryotic type
   Methyltransferases
    AV939_19935 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N RsgA_GTPase Dynamin_N Ras AIG1 AAA_28 ABC_tran Gtr1_RagA Roc Arf DUF5129 SRPRB MMR_HSR1_Xtn AAA_29
Other DBs
NCBI-ProteinID: AMJ88649
Position
complement(4691483..4692871)
AA seq 462 aa
MDSHIITTDTITAQATAPGRGGVGIVRVSGPHAKTIAATLVPTALTPRLATYTPFVDSQQ
NVIDQGIALFFKGPNSFTGEDVLELQGHGGQVVMDMLIDAVLSTGKARLANPGEFSEQAF
INDKLDLAQAEAIADLIDASSKQAARSALRSLQGEFSTQIQTLSDQIVHLRMYVEAAIDF
PEEEIDFLSDGKVSGDLAAILAHLQVVREQAKQGSLLREGMQVVIAGRPNAGKSSLLNAL
AGRDSAIVTEIAGTTRDVLKEHININGMPVHIIDTAGLRDSPDKVEQIGIERAWQAISEA
DHVLFVTDSTTTDVADPYKIWPEFMARLPEGIPTTVIKNKADLSELEVGLNNVKTEHGDM
PVINISAKESDGIDTLRDHLANTMGFDTTTEGQFIARRRHLDALEKAYQFVVIGEQQLHD
AMAGELLAEELRLAHQSLCEITGEFTSDDLLGKIFSSFCIGK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggattcacatatcatcacaaccgataccattaccgcccaagctactgcccctgggcgc
ggtggagtaggaattgtacgagtatcaggcccacatgctaaaactatagcagccactctg
gtacccacagccctaacacctagattggccacctataccccgtttgtcgatagccaacaa
aatgttatcgaccaaggtatcgcgctattcttcaaagggcctaattcatttacgggcgaa
gatgtattagagctgcaaggtcatggcggtcaggttgtgatggatatgcttattgacgct
gtgttatcgactggcaaagcgcgattagccaacccaggtgagtttagtgaacaagccttt
atcaacgacaagctcgatttagcgcaagctgaggctatcgctgatttaatagatgctagc
tctaaacaagcggcaagaagcgcgctacgttcgttacagggcgagttttcaacccaaata
caaacgttgtctgatcaaattgttcatttacgtatgtacgttgaagccgctatcgacttt
cctgaagaagaaattgatttcttatctgacggcaaagtgtctggcgatctagccgccata
cttgcgcaccttcaagttgtacgagagcaagctaagcaaggaagtctactcagagaaggc
atgcaggtggttatcgccgggcgccctaatgcgggtaaatcaagtttactaaatgcatta
gcaggccgagatagcgccatagtcaccgagattgcaggcactactcgtgatgtattaaaa
gagcatattaatattaacggcatgccggtacacatcattgataccgcaggtcttcgtgat
agcccggacaaagtagaacaaattgggattgagcgagcgtggcaagccattagcgaagcg
gatcacgtactttttgttactgattcaaccactactgatgtggcagatccttataaaatt
tggcctgaatttatggcgcgcttaccagagggtatcccaaccacggtaatcaaaaataaa
gcggatctaagcgagttagaagtaggcctgaataacgtaaaaaccgaacatggcgatatg
ccggttattaatatttcagcaaaagaaagcgacggtatcgataccctgcgagatcatttg
gccaacaccatggggttcgacactaccactgaagggcaattcatcgcccgaagacgccac
cttgatgcgttggaaaaggcatatcaatttgtggtgataggcgaacaacaacttcacgat
gctatggccggtgaactacttgcagaagaactgcggttagcccatcagtcattgtgtgaa
atcactggtgaattcacctcagacgacttacttggtaagatattttcatctttctgtatt
ggtaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (17)   
   Pfam (17)   
All databases (31)   

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