KEGG   Agrobacterium larrymoorei: CFBP5473_00285
Entry
CFBP5473_00285    CDS       T06268                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
alf  Agrobacterium larrymoorei
Pathway
alf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:alf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CFBP5473_00285 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alf03019]
    CFBP5473_00285 (pnp)
   03016 Transfer RNA biogenesis [BR:alf03016]
    CFBP5473_00285 (pnp)
Enzymes [BR:alf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CFBP5473_00285 (pnp)
Messenger RNA biogenesis [BR:alf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CFBP5473_00285 (pnp)
Transfer RNA biogenesis [BR:alf03016]
 Prokaryotic type
  tRNA degradation factors
   CFBP5473_00285 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 PCB_OB
Other DBs
NCBI-ProteinID: QCI96497
UniProt: A0A4D7DKS5
Position
circular:complement(54919..57063)
AA seq 714 aa
MFNQHSVEIEWAGRPLKLETGKVARQADGAVIATYGETMVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDVLSMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVA
GTQDAVLMVESEAKELNEEIMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPREFEPEDFSA
LENEMLGLAEAELRDAYKITEKAARYNAVDAVKAKVKAHFLPEEGEAKYTPEEIGAVFKH
LQAKIVRWNILDTKSRIDGRDLSTVRPIISEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALEQAQGGRTHILGEMAN
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEVVAEKKSEGDAAAE
NT seq 2145 nt   +upstreamnt  +downstreamnt
atgttcaatcaacattccgtggaaatcgaatgggcaggccgcccgctgaagctggaaacg
ggcaaggttgcccgtcaggctgacggcgccgtcatcgccacctatggcgagacgatggtt
ctcgcaaccgtcgtttccgcaaagtctccgaagccgggccaggacttcttcccgctgacg
gtcaactatcaggaaaagacctacgctgccggtaagatcccaggcggctacttcaagcgc
gaaggccgtccaagcgaaaacgaaacgctcgtttcccgcctgatcgaccgcccgatccgc
ccgctcttccctgaaggctacaagaacgacacgcaggtcgtcgtcacggttatccagcac
gatctggaaaacaacccggacgttctgtcgatggttgccgcttccgcagcgctgacgctt
tccggcgttcccttcatgggcccggtcggcggcgcgcgcgtcggctacatcaacggcgaa
tatgttctcaacccgcatctcgacgagatggacgagtccgttctcgacctcgtcgttgcc
ggtacgcaggacgccgttctgatggtcgagtccgaagccaaggaactcaacgaagagatc
atgctcggcgccgtcatgttcggccacaagggcttccagccggttatcgacgcgatcatc
aaactcgctgaagtcgccgccaaggagccgcgcgaattcgaaccggaagatttctccgct
ctcgaaaacgaaatgctcggccttgccgaagcagaactgcgtgatgcctacaagatcacc
gaaaaggctgcccgctacaacgccgtcgacgccgtaaaggcgaaggtcaaggcgcacttc
ctgccggaagaaggcgaagccaagtacacgcccgaagaaatcggcgctgtcttcaagcac
cttcaggcgaagatcgttcgctggaacattctcgacaccaagagccgtatcgacggtcgc
gatctctccacggttcgtccgatcatctcggaagtcggccttctgccacgcacgcatggt
tcggcgctcttcacgcgcggcgaaacccaggccatcgttgttgccacactcggcactggc
gaagacgagcagtatgtcgacagcctgaccggcatgtacaaggaacgcttcctgctgcat
tacaacttcccgccctactcggtcggtgaaacgggccgcatgggctccccaggccgtcgc
gaaatcggccacggcaagctggcatggcgcgcaatccgcccaatgctgccatctgccgag
cagttcccctacacgctgcgcgtcgtctcggaaatcaccgagtccaacggttcgtcctcc
atggcaaccgtttgcggcacctcgctcgctctgatggatgcaggcgttcctctggcaaag
ccggttgccggtatcgccatgggcctgattctcgaaggcgaccgtttcgcggttctctcc
gatattctcggtgacgaagatcacctcggcgacatggacttcaaggttgccggtacggca
gacggcatcacctcgctgcagatggacatcaagatcgccggtatcaccgaagagatcatg
aaggttgctctggagcaggctcagggcggtcgcacgcacattctcggcgaaatggccaat
gccatcaccgagagccgcggccagctcggcgaattcgcaccgcgtatcgaagtcatgaac
attccggtcgacaagatccgtgaagtcatcggctccggcggtaaggtcattcgcgaaatc
gtcgaaaagaccggcgcgaagatcaacatcgaagacgacggcaccgtcaagatcgcttcc
tcttccggcaaggaaatcgaagcggcccgcaagtggatccactccatcgtggcagagccg
gaagttggccagatctacgaaggcacggtcgtcaagaccgcagacttcggcgcattcgtc
aacttcttcggcgcacgtgacggcctcgttcacatctcgcagctggcttccgagcgcgtt
gccaagacctccgacgtcgtcaaggaaggcgacaaggtttgggtcaagctgatgggcttc
gatgagcgcggcaaggttcgcctctccatgaaggttgtcgaccaggcaaccggcaaggaa
gtcgttgctgaaaagaagagcgaaggcgacgctgccgccgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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