KEGG   Agrobacterium larrymoorei: CFBP5473_12350
Entry
CFBP5473_12350    CDS       T06268                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
alf  Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:alf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:alf03009]
    CFBP5473_12350
Enzymes [BR:alf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     CFBP5473_12350
Ribosome biogenesis [BR:alf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CFBP5473_12350
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: QCI98615
UniProt: A0A4D7DNL0
Position
circular:complement(2536049..2538061)
AA seq 670 aa
MTFKDKPKRAGGKTFDRGGKPKSSAKPSEAREKKPFKEKADAPVVETAAGKPERISKIMA
RAGVASRRDVERMIMEGRVSLNGVKLESPVVNATLDDKIEVDGQPIRGAERTRLWLYHKP
AGLVTTNSDPEGRPTVFDNLPGELPRVLSIGRLDINTEGLLLLTNDGGLSRVLELPTTGW
LRRYRVRAHGEVDQAALDKLKDGIAVDGVLYGAIDATLDRTQGHNVWISMGLREGKNREI
KNVLGALGLEVNRLIRISYGPFQLGDLPEGQVIEVRGRMLRDQLGPRLIEAAGANFDAPI
YDHKVEEDEEEAPAKPAKAEWGKQDSGERKSRDGAERPAGRFDNKRSDKPAGKFGAKPAG
KFASKGRDEDEADDRGPKRPPLGSNRTANVWMAPGAKPTRDGKARKLSARAEAESLFKKP
SAQAEARRAIVKHNDDEGSWIRSDSPKEDDRGVRGRGERGERSFGDRKPREAGDRPSRGS
FGDKPRGDRKFGDRPFGDRKPREDGERSFGDRQNRSDRPARGDRSFGDRPARGDRPFSDR
KPREEGDRSPRAERSFGDRPARSERPFSDRKPREDGDRPARSERPFGDKPRGAKPFGGKP
AGGKPGFGKPRGERSEGGAGGRGFGGKGGANKGSGGKGPGNGGGRGPGGKPSGGKPSGGK
GMTRNADRRR
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgacattcaaagacaagccgaagcgcgctggtggcaagacattcgaccggggcggcaag
ccgaaatcatcggcaaagccgtccgaggcccgtgaaaagaagcctttcaaggaaaaggcg
gatgcacccgttgtagaaacggcagcagggaaacccgagcgcatctccaaaatcatggcg
cgcgcaggcgtggcttcacgccgcgatgtcgagcgcatgatcatggaaggccgcgtttcg
ctgaacggcgtcaagcttgaaagcccggtggtcaacgccaccctcgatgacaaaatcgag
gtggatggccagccgatccgtggtgccgagcgcacacgcctctggctctatcataagccc
gccggtctggtgacgaccaattccgatccggaaggccgcccgaccgtcttcgacaatttg
ccgggtgagcttccgcgcgtgctgtccatcggtcgtctggatatcaacaccgaaggcctg
ctgctgctgaccaatgatggcggtctgtcgcgcgtgctggaactgccgaccaccggctgg
ctgcgccgttaccgcgtgcgcgcccatggtgaggtggatcaggcagcgcttgacaagctg
aaggacggcattgccgtggacggcgtgctttacggcgcaatcgatgcgacgctcgaccgc
acccagggccacaatgtctggatcagcatgggcctgcgcgaaggcaagaaccgcgaaatc
aaaaacgtgctcggcgcgctcggtctcgaagtgaaccgcctgatccgtatctcctacggc
ccgttccagcttggcgatctaccggaaggtcaggtcatcgaggtgcgcggacgcatgttg
cgcgaccagctcggccctcgtctgatcgaggcagcgggcgcgaatttcgatgcgccgatc
tacgaccacaaggtcgaagaggacgaagaagaagcgcctgcaaagccagccaaggccgaa
tggggcaaacaggacagcggcgaacgcaaatcgcgcgatggcgcggaacgtcccgctggc
cgcttcgataacaagcgctccgacaagcccgcaggcaaattcggcgccaagcctgccgga
aagtttgcgtccaagggccgggatgaggacgaggcggatgatcgcggcccgaagcgcccg
ccgctcggcagcaaccgcaccgccaatgtctggatggcgcccggcgccaagcccacacgc
gatggaaaggcccgcaagctttcggcccgcgccgaagcggaaagcctgttcaagaagccg
tcggcacaggctgaagcccgccgcgccattgtcaagcataatgacgatgaaggcagctgg
attcgctccgattcgccgaaggaagatgatcgtggcgtacgtggtcgcggtgaacgcggc
gagcgttccttcggtgacagaaagccacgcgaagcaggcgaccgcccatctcgcggttcg
ttcggcgataagccgcgcggagatcgcaagttcggggatcgtccgtttggcgaccgtaag
ccacgtgaagacggcgagcgctctttcggcgacaggcagaaccgctcggatcgcccggcg
cgtggcgacagatcattcggcgaccgcccagcgcgtggagatcgcccgtttagtgatcgc
aagccgcgcgaagaaggtgaccgttcccctcgggctgagcgttccttcggggatcgtccg
gcccgcagcgaacgtcctttcagcgaccgcaaaccgcgtgaggatggtgatcgtcccgca
cgtagcgagcgtccgttcggcgacaaaccgcgtggcgcaaagccctttggcggcaagcct
gccggtggcaagccgggcttcggcaagcctcgcggtgagcgctccgaaggcggtgccggc
ggtcgtggattcggcggcaagggcggcgcgaataagggttcgggtggcaaaggtccgggc
aatggcggtggacgcggccccggcggtaaaccttccggtggcaagccttctggcggtaag
ggaatgacgcgtaatgcggatcgtaggcggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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