KEGG   Agrobacterium larrymoorei: CFBP5473_23415
Entry
CFBP5473_23415    CDS       T06268                                 
Symbol
traR
Name
(GenBank) transcriptional regulator TraR
  KO
K19732  LuxR family transcriptional regulator, activator of conjugal transfer of Ti plasmids
Organism
alf  Agrobacterium larrymoorei
Pathway
alf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:alf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CFBP5473_23415 (traR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:alf03000]
    CFBP5473_23415 (traR)
Transcription factors [BR:alf03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    CFBP5473_23415 (traR)
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 DUF6042
Other DBs
NCBI-ProteinID: QCJ00942
UniProt: A0A4D7DV61
Position
pTiCFBP5473:complement(98448..99152)
AA seq 234 aa
MQHWLDKLTDLAAIEGDECILKTGLADIANHFGFTGYAYLHIQNRHITAVTNYHREWQSV
YFNKKFDALDPVVKRARSRKHIFTWSGEQERSTLSKGERAFYAHAADFSIRSGITIPIKT
ANGSMSMFTLASEKPVIDLDREIDAIAAAATIGQIHSRISFLRTTPTAENAVWLDPKEAT
YLKWIAVGMTMEEIADIEGVKYNSVRVKLREVMKRFDVRSKAQLTALAIRRKLI
NT seq 705 nt   +upstreamnt  +downstreamnt
atgcagcactggctggataaattgaccgatcttgccgcgattgaaggcgatgagtgcatc
ctgaagacggggctggcggacatagccaatcatttcggctttaccggttacgcctacctt
cacatccagaatcggcacattaccgccgtgaccaattatcatcgcgagtggcagtcggtc
tatttcaataagaaatttgacgctctcgatccggtcgtcaaacgcgcaaggtccaggaag
cacatcttcacctggtcgggcgagcaagagcgctcgacgctgtcgaagggcgagcgcgcc
ttctatgcccatgcagccgacttcagcatccgctccggcattaccattccgatcaagacc
gccaacgggtcgatgtcgatgttcacgctggcatcggagaagccggtgatcgatctcgat
cgggagatcgacgcaattgcagctgcggcaaccattgggcagatccattcccgcatctca
ttccttcgcactacacccacggcggaaaatgccgtgtggctcgatcctaaagaagcgacc
tatcttaaatggatcgcggtcggcatgacgatggaggagatcgccgacatcgagggggtc
aagtataacagcgtccgggtgaagcttcgtgaggtgatgaagcgcttcgacgtccgctcc
aaggcgcagctgaccgcgctcgcaatccggcggaaacttatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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