KEGG   Austrofundulus limnaeus (annual killifish): 106516813
Entry
106516813         CDS       T06063                                 
Symbol
tpr
Name
(RefSeq) nucleoprotein TPR
  KO
K09291  nucleoprotein TPR
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106516813 (tpr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alim03019]
    106516813 (tpr)
Messenger RNA biogenesis [BR:alim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106516813 (tpr)
SSDB
Motif
Pfam: TPR_MLP1_2 Cep57_CLD_2
Other DBs
NCBI-GeneID: 106516813
NCBI-ProteinID: XP_013862807
UniProt: A0A2I4B4Y8
Position
Unknown
AA seq 1975 aa
MAALLLQEFEASELSXIPEAIKNRLERILSVLHSEIDSLKAQHQQYLVDIEQQFFEKDGQ
LARTELLTQEHHKLREEYNRLSEELQSVREKNEESERAREKLSSEQTLLSRAKGELEAEK
RELVRTLDRRSLEIEHLNDDLRQLNDKLVEVSTSKMTLQMKLDELEAAELNIKYKEKRMD
QEKKLLHDQMSWLQDELKAKTEELLSLSREKGNEILELKCTLENKEDELKKLQDQVASLK
TSNEHHQKQNEDMINKLRDAKEQHAIMEEKFRKELNANIKLSNLYKEEAADSEAKSKELS
GAVDELQKLLKEAGHANKALEDKLQEMNAASDKAVSELKNRIQSLEKELDNANELLSSSK
RRGSVGASVLTEDQMTTMSPTAAAVSKIKPGMKLTELYTAYLESQEQLQLERLENKRVNK
YLDDIVQEVESKAPLLKRQRDEHERMQKSVASLSARLEQAMKDVHRLQNEADGAKKHASV
LERENQRFEFQVSDLAQQVRVLLIELEEARGNHVLHEEEMSSADVSSTSEVISQNLVTFR
SVEELQTQNQRLLVAFRELXDAQEKEEFETTDNWRVEQEQRWGNVQAELESLKEQRNQLL
KMTDSIVKQRDMYRVLLAQATGVTFPQQGTPPDEFSLTSTPRRSPAATPTAGTPTALVSM
AAESAEALEAKAALRQLQEVFSSYKSERSESEKAMAEQNEKLQEQLSDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRKEIASLRDKEQKMSAAKQTLEQTVHTLNEELKATKEKLSMTE
GDAENLRKERDMLKLVESTLNQEKEDILRQQQSQRLLQIDLQAIRSTLERSESETRQRLN
SQLEKKEQENSQLQKRLEQEVEQRHLFSRNQEMQLMDVKRQLETQVALNQKLKEQLNDAE
LELNTLKIQQGSNETRHTLSSPSASIRGLQGSDGDGERLQGRLQLAETRVEEQAERLKVI
TSNMEQYRAMAQSLEESLEREKQVTEQVRSATETRLKEAGEQQRRLEEKLLEAEKEKQNL
EEQKRSTVXSLEEQINDLKRNLSSAQAEHQVMLQQLAVAETQQQQALMDSQEQAKLAAEA
QDKYEQEMILHAADVEALQAVKAQAQQAVEFRHQLEEKVQRLSSELLEARVSWEEQEKIL
KEEMSKMESRHEELQRQNTLLHEQVQTLSNKLADNLQRASSESSLNISLTEEGKSEDQLL
EILRFVRREKEIAESRFEVAQGETLRHRLRVEHLERELKEVQDSLGAARERMQVTAKTLA
QHDELMNKTETMNILVETNKMLREEKEKMXQELQQSQAKVQQLESEVLPLQEANSELSER
SGIMTGEKLILEEEVKRWKARTQQLVSQQRDSDPDEFKRLHSEKEVHVKRIQQLCEENGR
LSRELTRTNANTISIQGQLQNVRDXMGKVTEERNALKRELETKTQELQEKMRTINQVKKI
GRRYKTQYEELKVEHDKLVAEAAAGPSQDEEARQASVHELQSVKDSLSQTETRNKELEGQ
LENINKVVTEREAEVRSAQEQSARLQTELTRLRQELQDKASQEDTLKQQMTEKEEKTRKV
LLNAKQKISHLTNSKDQMQKENEELKEKLKEAEMRMSALKSQYESRLSKRSQQERQDQRD
EAPEAGPSKIQEQQRGTEQRQISLKTTSAADRGSACTSEPPTANIKPTPVVATASKQTNI
PSNKPTPRASIRPMITPAPVPTPTPTATVMPTTQVETQEAAMQSSEGPPVEHVTVYGSAS
GSVRSASPNVQTTLASPILTVQQIQTQATAFVQPTQQQSVTHPEPANQEPPPVVIEAAPS
PQVDWPSTFPTTSVFGTVSATPGTSALTKRPREEEESSAVAIDTEAAQEDNSRAPIPKKL
RINQRVGQEEEMQAEDSAEPEGVVPTDSQDGAEVNQQTEEFSNLEEAEDAATSQSMSVEQ
LLTPAQSETPDPLQHEVIVILTDSESEEHEEERSFQTWRKPKTLQPPSQCQWSNY
NT seq 5928 nt   +upstreamnt  +downstreamnt
atggcggcactcytgttgcaggagttcgaggcttccgagctttcttygatacctgaagcg
attaaaaacagactagaaagaattctgtctgttcttcattctgaaatcgattcgttaaaa
gcgcagcatcaacagtatctggttgacatcgaacaacagttttttgaaaaagatggccag
cttgctcggacggagcttttgacccaagaacatcataaactcagagaggagtacaacaga
ctcagtgaggagcttcaaagtgtccgtgagaagaatgaagagagcgaaagggcgcgtgag
aagctgtcttcggagcagactttgctctcaagggccaaaggagaactggaggcagaaaag
cgagaacttgttcgaacattggatagaagatccctggaaatagagcatttaaacgatgac
ttgaggcagcttaatgataaattagtggaagtcagcacctctaagatgactctgcagatg
aagctggatgagcttgaagctgcagaactaaacataaaatataaagagaagcgaatggat
caagaaaagaagctgctacatgaccaaatgtcttggttacaagacgagttgaaggccaaa
acagaagagctgctgtctttgtcccgagagaagggtaatgaaatcctggagctaaaatgc
accctggagaataaagaagacgagttaaaaaaacttcaagatcaagtggcgagtttgaag
acttcaaatgaacaccatcaaaaacaaaatgaggacatgatcaacaaactaagagacgca
aaggagcaacatgccatcatggaggaaaagtttaggaaagagctaaatgccaacatcaag
ctttccaatttatacaaggaagaagcagcagattctgaggctaagagtaaggagctgagt
ggggcagtggatgaactacagaagttgctgaaagaagctggacatgctaacaaggctctg
gaagacaagctacaggaaatgaatgctgcatcagataaagctgttagtgaattaaaaaac
aggattcagagtcttgagaaagagctggacaacgccaatgaactgctctcaagttctaag
cgtagaggctctgttggtgcgtctgtgctgactgaggatcaaatgacaacaatgtctcca
acagcagcagctgtgtccaaaataaaacctggcatgaagctaactgagttgtacacagcg
tatctggagagccaggagcagctgcagctggagcgactggagaataaacgagtcaacaag
tatttagacgacatcgtgcaggaagtagaatctaaagccccgctcctcaaacgacaaagg
gatgaacatgaacgcatgcagaagtctgtggccagtctgtctgccagattggagcaagct
atgaaggatgtgcaccgtctacagaatgaggctgatggtgccaaaaagcatgcttctgtc
ctggaaagggaaaaccagaggtttgaattccaggtgtctgatttggctcaacaggttcga
gtactgcttatcgagctggaagaggctcgtggaaaccacgtgcttcatgaggaagagatg
agctccgctgatgtcagcagtacttcagaggtgatcagccaaaacttggtaaccttccgy
agcgtggaagagcttcagacgcagaaccagcgtcttctggtggctttcagggagctcwgt
gacgcccaagagaaagaggagtttgagaccactgacaactggcgtgtggagcaggagcag
aggtgggggaatgttcaggcggagttggagtctctgaaggagcaacgcaaccagctgcta
aagatgackgattctattgtgaagcagagggacatgtaccgcgtgctgttggctcaggcc
acaggagtcaccttccctcaacaaggaacaccacctgatgagttctccctgacatctact
cccagacgttcacctgcagccactcccaccgcagggacaccgactgcacttgtttccatg
gctgcagagtctgctgaagcactggaggccaaagcagctttgagacagttgcaggaagtg
ttctcctcctataagagcgagcgttcagagagtgaaaaggcaatggccgagcaaaacgag
aagctccaggagcagctgtccgatcttcgctctcagaatgccaagatatccacccagcta
gaatttgcttcaaagaggtacgagatgcttcaggacaacgtggagggctacaggaaggag
atcgcctcacttagagataaagaacagaagatgtctgctgccaagcagacactggagcag
actgttcacactctgaatgaggagcttaaagctaccaaggagaagctcagcatgactgag
ggcgatgctgagaaccttcgcaaggagagagacatgctgaagctggtagaatctacactg
aaccaggagaaggaggacatcctgcgtcaacagcagagccagaggctgctgcagatcgat
ctacaggctattcggtccactcttgagcgttcagagagcgaaacgcgccagcgtctcaac
agccagctggagaagaaggaacaggagaactctcagttgcagaagaggctcgaacaagaa
gtggaacagcgtcacctgttcagcagaaaccaagaaatgcagttaatggacgtgaagagg
cagctggagacacaagttgctttaaatcagaaactcaargagcaactgaatgatgctgag
ttggagctcaacaccctcaagattcagcagggtagcaatgaaacacgccacaccctgagc
tccccgtctgcatccatcagaggtctgcagggttcagatggagacggagagaggctccaa
ggccgcctgcaactagccgaaacccgagtagaggagcaggcagagaggcttaaggtcatc
acctccaacatggagcagtacagagccatggctcaaagcctggaggagtctctggagagg
gagaaacaggtaacagagcaggtccgctcagccactgaaacccgtctgaaggaagctggg
gagcagcagcgcaggctggaggagaagctcctggaagcrgagaaagaaaaacaaaacctg
gaggagcagaaacggagcactgtggmctccctggaggagcagatcaatgacctgaagaga
aatctcagcagtgcccaggcagaacaccaggtgatgctgcagcagctggctgtagctgaa
actcagcaacagcaggctctgatggacagccaggagcaggctaagctagcagctgaagcc
caggataaatatgagcaggagatgattctgcatgcagctgatgtggaggctctgcaggcc
gtcaaggctcaagctcagcaggccgtcgagttcagacatcagctggaggagaaagtccag
cggctcagttctgagttactggaggccagagtctcctgggaagagcaggagaagatcctc
aaggaggagatgtccaagatggaaagccgccacgaggaattgcagaggcagaatacgctc
ctgcatgagcaggttcagacgttgagcaacaaactggctgacaatctgcaacgagcttct
agtgagagttcactcaacatatctttgactgaagagggaaaatctgaagaccagcttctt
gagattctcaggtttgttcgtcgagaaaaggagattgcagagtctcgttttgaggtggcc
caaggggaaactttgcgtcaccgtttgagagtggagcacttggagcgagagctcaaagag
gtgcaggacagtttgggtgctgcgagggaacgaatgcaggtaactgcaaagaccctggct
cagcacgatgaactaatgaacaagactgaaacaatgaacatcttggtggagaccaacaag
atgctgagagaggagaaggagaaaatggytcaggaactgcagcaaagccaagctaaggtg
cagcagctggagtctgaagttttgccgcttcaggaggctaactctgagctgagtgagaga
agtggcataatgacgggagagaagttgatactggaagaggaagtgaagcgctggaaggct
cgaacccagcaattagtgagtcaacaaagagattcagatcckgatgagttcaagcgtctg
cattctgagaaagaggtacacgtgaaacgcatccagcagctctgtgaggagaacggtaga
cttagtagggagttgaccaggacaaatgctaacacaatatccatccagggccaactgcag
aatgtgcgtgacartatgggtaaggtgaccgaggagaggaatgcattgaagagggaactg
gaaactaagacccaggaactccaggagaagatgcgaaccatcaaccaggttaagaagatc
gggcgacgctacaagactcagtatgaagagcttaaagtggaacatgacaaactggtggca
gaggctgcggcaggcccatcccaagacgaggaggcacgtcaagcctcggttcatgaactg
cagagcgttaaagattctttgagccagactgaaaccaggaacaaagagctggaaggacag
ctcgagaacatcaacaaggtggtyacggagcgagaggccgaggtacgcagtgctcaggaa
cagtctgccaggttgcaaacggagctracgaggttgaggcaggagctgcaggataaggct
tctcaggaggacaccttgaaacagcagatgactgagaaggaggagaagaccaggaaggtt
cttcttaatgccaagcagaaaatcagccacctcacaaattccaaagaccagatgcagaag
gagaacgaagaattgaaggagaagttaaaggaggcggagatgcgaatgagtgctctcaag
tctcaatacgagagccgacttagtaaacgatctcagcaggagagacaggatcagagagat
gaggcacctgaggcagggcctagcaagatccaggagcagcagaggggcacagagcagaga
cagatcagtttgaagaccacctcggctgcagacaggggcagtgcctgcacttctgagcct
ccaactgccaacattaagccaacacctgtagttgctacagcgagcaaacagaccaacatc
ccaagtaacaaacccactccacgagcaagcatcaggccgatgatcaccccggcccctgtg
cccacgccaacaccaactgctaccgtcatgcccaccacacaggtggagacacaggaagca
gccatgcagtcaagcgaaggcccgccggtggagcatgtgacggtgtacggcagtgccagc
ggctctgtgcgctccgccagccccaacgttcagaccacgctggctagccccatcctgacc
gttcagcagatccagacgcaggccacggcttttgttcagccaacgcagcagcagagcgtg
acccacccagaaccagccaatcaggagccaccgcctgtagtgatcgaagcagcgcctagt
cctcaggtggactggccgtcaacattccccaccacgtctgtgtttggcactgtttcagcc
acacctggaacttctgctttgaccaagaggcctcgtgaggaggaggaaagcagtgccgtg
gccatcgacaccgaggcagctcaggaggacaattccagggctcccatacctaaaaagctg
cgcatcaaccagagagtgggtcaggaggaggagatgcaggctgaggacagtgctgagcct
gagggggtggtgccaacagacagtcaagatggtgcagaagtgaaccagcagacagaggag
ttttcaaacctggaggaagccgaagacgctgcaacctcccagtcaatgtcagtggagcaa
ttattaacacccgcccaaagcgaaacccccgacccactgcagcacgaagttatcgtcatt
ttaactgacagcgagagtgaagaacacgaagaggagaggagttttcaaacctggaggaag
ccgaagacgctgcaacctcccagtcaatgtcagtggagcaattattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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