KEGG   Austrofundulus limnaeus (annual killifish): 106518685
Entry
106518685         CDS       T06063                                 
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03013  Nucleocytoplasmic transport
alim03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106518685 (rnps1)
   03015 mRNA surveillance pathway
    106518685 (rnps1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alim03019]
    106518685 (rnps1)
Messenger RNA biogenesis [BR:alim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     106518685 (rnps1)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_occluded RRM_5 PI3K_1B_p101
Other DBs
NCBI-GeneID: 106518685
NCBI-ProteinID: XP_013865513
UniProt: A0A2I4BCQ9
Position
Unknown
AA seq 320 aa
MFSSSSTALILRKLRPAFRSSTTLCLAASSSRPMVIHFRTILAPSPTKRKEDEKTKDRGK
EKTGTKEGEKERGREKVRKRRSASSGSSSSSRSSSSSSSSSGSSSGSSSGSSSSGSSRSG
SSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSPSKTQKRGEDKERRKRSPTPKPTKVHLGR
LTRNITKEHIQEIFSTYGKIKMIEMQIDRLHPHLSMGRAYVEFETSEEAQKALKHMDGGQ
IDGQEITAAAVLPQRLRPPPRRLSPPRRMPPPPPMWRRSPPRMRRRSRSPRRRSPARRRS
RSRSPGRRRHRSRSSSNSSR
NT seq 963 nt   +upstreamnt  +downstreamnt
atgttctccagttccagcacggctttgatcttacggaaactgagacccgccttccgcagc
tccaccactttgtgtttggcagcatcatcgagccggcccatggtcattcacttcagaaca
atcctggcaccatcgccaacaaaaaggaaggaggatgaaaaaacaaaagatagaggtaaa
gaaaaaactggtaccaaggaaggagaaaaggagagaggacgggagaaagtaaggaaacgt
cgcagcgcctcctctggcagcagcagcagcagcagatccagctcatcatccagcagcagc
tctggttccagctcgggctcctcaagtgggtccagctcctctggttccagccgctccggg
tcgtcgagctctcggtcatcttcctcttccagctcctcgggctctccaagccccagccgc
aggcgtcatgacaaccgcagacgctcccgctctccctctaaaacacagaagaggggagag
gacaaggaacgacgaaaacgaagccccacccctaaaccaacaaaagttcatttaggaagg
ctgaccaggaacataaccaaggagcacatccaggagatcttttctacttatgggaaaata
aaaatgattgagatgcagatcgacaggctccacccacacctgagtatgggccgtgcttat
gtggagtttgagacctccgaggaggctcagaaggccctcaaacacatggatggaggtcag
attgatggacaggaaatcactgcagctgctgtgctgcctcagcggctccgtcctcctcct
cgtagactgtctcctccccgcaggatgcccccgccaccaccaatgtggcgtcgcagccca
ccacgcatgaggagaaggtctcgctccccaaggaggcggtccccggcccgtcgccgctcc
cgctccagatctcctggtcgcaggcgccaccgctctcgttccagttccaactcctcaaga
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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