KEGG   Austrofundulus limnaeus (annual killifish): 106521413
Entry
106521413         CDS       T06063                                 
Name
(RefSeq) transcription elongation factor B polypeptide 2
  KO
K03873  elongin-B
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106521413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106521413
   03400 DNA repair and recombination proteins [BR:alim03400]
    106521413
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     106521413
   Cul5 complex
     106521413
DNA repair and recombination proteins [BR:alim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106521413
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 106521413
NCBI-ProteinID: XP_013869421
UniProt: A0A2I4BNV0
Position
Unknown
AA seq 119 aa
MDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKRPPEDQRLYKDDQLLEDSKTLGDC
GFTSLTARPQAPATVGLAFRVNDEMFEQLHIEAFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atggacgtgtttttaatgatccggcgtcacaagacgacgatcttcacagacgctaaggaa
tccaccactgtgtatgagctgaagcgaattgttgaaggaatacttaagagaccacctgag
gaccagcgactttacaaagatgatcagttgctagaagacagtaaaacactgggggactgt
gggtttaccagcctgactgccagacctcaagcaccagctacagtcggactggcctttcgt
gtaaatgatgagatgttcgagcagctgcacatcgaggccttctccagccccccagagctc
cctgatgtaatgaagccgcaggactccggtagcactgccaatgagcaggcggtgcagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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