KEGG   Austrofundulus limnaeus (annual killifish): 106527717
Entry
106527717         CDS       T06063                                 
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
  KO
K11985  TRAF-interacting protein [EC:2.3.2.27]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106527717 (traip)
Enzymes [BR:alim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106527717 (traip)
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106527717 (traip)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 AAA_13 zf-RING_5 zf-RING_11 zf-C3HC4_4 Crescentin WEMBL Gp58 FliJ Laminin_II COG3_N Uds1 Lzipper-MIP1 DUF2968 Zn-ribbon_8 RINGv zf-RING_16 HIP1_clath_bdg KASH_CCD CENP-F_leu_zip zf-RING-like SWIRM-assoc_1 KxDL FANCL_C Filament DUF730 APG6_N GAS DUF1664 Aida_N ABC_tran_CTD zf-Nse DUF4055 FliD_N
Other DBs
NCBI-GeneID: 106527717
NCBI-ProteinID: XP_013878152
UniProt: A0A2I4CDT1
Position
Unknown
AA seq 449 aa
MPIRAYCTICSDFFDHXKDVAAIHCGHTFHYECLLQWFQTAPTKTCPQCRKQVSTRHIIS
KLFFDIGGEEEGTANPERLQNELNQMKALLSSRERDWRDKQKVMDSLKNTVDKQKRDLES
TRKEIMDKEMLCAALRKQMTYLETQQNAVQAAKEEVRRLKVKMKTFESLDVLLQGQRAEV
ESMITDMGVSSAAVEQLSIYCISLKKEYDNLKGNLKSSNELCEKLKREVLSSNNKLQKAA
CEVNQTKDDMKSLQKDLASADKEISSLNKKVEFLQKTLSTPTRTNEALSRLVFESPAPVE
LKPPRLHQSPGNDDIDLNMTYDITTPDDLTKRPTEVPSKKMRLDPPVRCVSKHSEKSPPE
SRPQDKDSFLSPMMRNSLLFRKKTLGSMLDPQRKAGIVRSGYDGLGGRTKFIQPSPLSEI
RPLMKTKRKKVTRPPPKAAPCLTLDGFLQ
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcctatccgggcatactgcacaatctgctcggatttttttgatcattycaaagatgtt
gctgccattcactgcggacacacgtttcactatgaatgtctccttcagtggttccagaca
gccccaacaaaaacctgtccacagtgtaggaaacaggtcagcaccaggcacatcatcagc
aaactgttcttcgacattggtggagaggaggagggcacagcaaaccctgagagrttgcag
aatgaactcaatcagatgaaggcacttctaagctccagagagcgggactggcgagacaaa
cagaaagtgatggacagtttaaagaacaccgtggacaagcaaaaaagagacctggagagt
acgcgaaaagagatcatggataaagagatgctgtgtgctgctctcagaaaacagatgacg
tatttggagacacaacagaatgctgttcaggctgcaaaggaggaggtccgcagactgaag
gtcaaaatgaaaacttttgaaagtctggacgttctgttgcagggccagagagcagaggtg
gagtccatgatcacagatatgggcgtcagctcygcagctgtggagcagctctccatttac
tgtatctctctcaaaaaagagtatgataatctcaaaggaaacctcaagtcttccaatgag
ctgtgtgagaaactgaagagagaagttctctcttctaacaacaagttgcaaaaagctgcg
tgtgaggtgaatcagaccaaagacgacatgaagtccttgcagaaagatctggccagtgct
gacaaagagatctcaagtctgaayaagaaggtggagtttcttcagaagactttgagcacg
ccaacgcgaacaaacgaagctctcagtcggctcgtctttgaaagcccagctccagtggag
ctgaagccaccacgcctccaccagtctccaggtaatgatgacattgatctcaatatgacc
tatgacatcacaactccagacgacctgaccaaaagaccaacagaggtcccatccaagaag
atgcgtctagacccccctgtacgatgtgtgtccaaacatagtgagaagtctccaccagag
agcaggcctcaagataaagattcgttcctgagtccgatgatgaggaactctctacttttt
aggaagaagactttaggcagcatgttggaccctcagaggaaggctggaatcgttagaagt
ggttatgatggattaggaggaagaactaaattcatccaaccttctcccctgtccgagatt
cggcccctgatgaaaacgaaaaggaaaaaggtgacccggccgccccccaaggctgccccc
tgtttgaccctggatggcttcctccagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (40)   
   Pfam (40)   
All databases (51)   

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