KEGG   Austrofundulus limnaeus (annual killifish): 106529506
Entry
106529506         CDS       T06063                                 
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
  KO
K08036  transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:alim03000]
    106529506 (hnf1a)
Transcription factors [BR:alim03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain POU
    106529506 (hnf1a)
SSDB
Motif
Pfam: HNF-1B_C HNF-1_N HNF-1A_C Homeodomain Telethonin HTH_37
Other DBs
NCBI-GeneID: 106529506
NCBI-ProteinID: XP_013880412
UniProt: A0A2I4CK97
Position
Unknown
AA seq 561 aa
MEGEEKXTAANARPSRLTALQEQLIWALLESGLSRDVLVQAVGELERSKAGGGPDRGEKG
DGESSEEGEMDFPPPIFRDLEKLPPDEASKLRAEVDRLLQEDPWHVAKMVKSYMQQHNLP
QREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKQCEISQQFTNAKHGLAPAEE
QGEETKKGRRNRFKWGPASLQILFNAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQL
AGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTSFTSQSASSSNPALPQSPEHGVKYSQ
QISCDTVSSGRGGAVERVGRLVVSPVQLEPSHTLLETHNPKLVSSNGPLPPVSTLTSLHS
LSASPASSQSLIMASVPSVMSLGESSLLIGLASTQPQTVPVINNMGGGFTTLQPISFQQQ
LHASHQQPLSQQLQSHMAASPFMATMAQLPCHMYKSDSPQYHSSSLLSQAMVITDSSSLG
TLTSLAAVRQILTADPEEGTDSPLQDDSLHLQPHTPVPASSESLELYPSSQMTERHPSHI
LSPSPTDISSYMPTQMVSTAQ
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggagggagaggaaaaggygacagcagcaaacgccaggccgagccgtttgaccgccctt
caggagcagctcatctgggccctgctggaatccggactgtcccgggacgtcctggtccaa
gccgtgggggaactggagcgaagcaaggccggcggcgggcccgacaggggagagaagggg
gatggagagagctcggaggagggagaaatggatttcccgccgcctatattccgagatttg
gagaagcttcctccggatgaggcgtccaagctcagggctgaagtcgacagattactgcaa
gaggacccctggcatgttgcgaaaatggtgaaaagctacatgcagcagcacaacttacct
cagagagaggtagtggagtccacgggactcaaccagtcccacctgtcccagcacctcaac
aagggcacgcccatgaagaaccaaaagagagccgctctgtacacctggtacgtcaagaag
cagtgcgagatcagccagcagtttaccaatgccaaacacggcctcgcacctgcagaagaa
caaggagaggaaacyaaaaaggggcgaaggaacagatttaagtggggtcctgcatccctg
cagatcctcttcaacgcctacgaacgacaaaagaaccccagcaaggaggaaagagagggg
ctggtggaggagtgtaacagggcggagtgtctgcagaggggggtgtctccctcccagctt
gctggtctgggctccaacctggtcaccgaagtccgagtgtacaactggttcgccaaccgc
cgcaaagaggaggccttccgtcacaagctggccctcgacacatctttcacctcccagtca
gcttcctcctctaaccccgccctcccgcagagccccgagcacggtgtgaaatacagccag
caaatctcgtgtgacacagttagctcaggtagaggcggcgccgtggagcgagtggggcgt
cttgtggtcagtcccgtccaactggaacccagccacacactcctcgagacccataaccca
aagctggtgtccagcaacggccccctgcccccagtaagcactctgacgtccctgcacagc
ctgtctgcctcccctgcatcttcacagagcctcatcatggcttcagtgccgagcgtcatg
agtctaggagagtcctcgcttctcattggattagcttccacgcagccacagaccgtcccc
gttataaacaacatgggaggaggtttcacaactctccagccgatctcattccagcagcag
ctccacgcctcccaccagcagcctttatcacagcagcttcagagccacatggctgccagt
cccttcatggcgaccatggctcagctgccatgtcacatgtacaagtcggactcgccccag
taccactcgtccagcctgctgtctcaggccatggtcatcactgacagcagcagcctgggg
accctgaccagccttgctgcagtcagacagattctcacggcagacccagaggaagggaca
gactcacctttacaagatgattcattacacctgcagccgcacacacctgtgccagcttcc
tctgagagcctggagctgtatccttcctctcagatgacagagcgccatccatctcacatc
ctctcaccatcaccgacagacatcagctcctacatgccgacacaaatggtctctacagcc
cagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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