KEGG   Austrofundulus limnaeus (annual killifish): 106532634
Entry
106532634         CDS       T06063                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03020  RNA polymerase
alim03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106532634
  09124 Replication and repair
   03420 Nucleotide excision repair
    106532634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alim03021]
    106532634
   03400 DNA repair and recombination proteins [BR:alim03400]
    106532634
Transcription machinery [BR:alim03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106532634
DNA repair and recombination proteins [BR:alim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106532634
SSDB
Motif
Pfam: RNA_pol_Rpb4 BIG2_C Tfb4 Rop
Other DBs
NCBI-GeneID: 106532634
NCBI-ProteinID: XP_013884202
UniProt: A0A2I4CW42
Position
Unknown
AA seq 143 aa
MAAGGAAPPQLGDVEEDASQLLFPKEFESAETLLNSEVHMLLEHRKQQNESAEDEQELSE
VFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSLE
GRFEDEELQQILDDIQTKRSFQY
NT seq 432 nt   +upstreamnt  +downstreamnt
atggcggctggaggcgccgctcctccgcagctcggagacgtagaagaagacgcttcacag
ctgctgttccccaaagagtttgagagcgcagagactctgctgaactcggaggtccacatg
ttgctggagcacaggaagcagcagaacgagagcgccgaggacgagcaggaactgtccgag
gtcttcatgaagaccctcaactacacggcccgcttcagccgcttcaagaaccgggagacc
atcaccgccgtccgcagtctcctcctgcagaagaagctccataagttcgagctggccagt
ttggccaacctgtgtcctgaagcagctgaagaggccaaagctctgatccccagtttggag
ggtcggtttgaagacgaggagctgcagcagatcctggacgacatccagaccaagaggagc
ttccagtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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