KEGG   Austrofundulus limnaeus (annual killifish): 106537362
Entry
106537362         CDS       T06063                                 
Name
(RefSeq) laminin subunit alpha-1-like
  KO
K05637  laminin, alpha 1/2
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim04510  Focal adhesion
alim04512  ECM-receptor interaction
alim04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:alim00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    106537362
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    106537362
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    106537362
SSDB
Motif
Pfam: Laminin_G_1 Laminin_G_2 Laminin_N Laminin_EGF Laminin_B Laminin_II Laminin_G_3 Laminin_I Transcrip_act
Other DBs
NCBI-GeneID: 106537362
NCBI-ProteinID: XP_013890193
UniProt: A0A2I4DD81
Position
Unknown
AA seq 2416 aa
MKLLLLLLLFLMQQAAAQQRGLFPAIFNLATNAEISSNATCGAPEPEVYCKLVEHVPGRR
MKNSHCSRCDANSVQSKERHPITNAIDGTNRWWQSPSIKNGPQFHWITITLDLKQIFQVA
YIIIKAANSPRPGNWILEHSLDGVTFDPWQFYAIGDSECLSRYNITPRLGPPTYRSDIEV
ICTSYYSKLNPLEQGEIHTSLINGRPGADDLTPDLLNFTSARYIRLRLQRIRTLNADLMT
LSTHDPQDIDPIVTRRYFYSIKDISVGGMCICYGHAQSCPLDLVTKKLQCVCEHNTCGEN
CNDCCPGYHQVPWKPGTISERNTCEKCNCHNKAIDCFYNQTVSELSLSLNTHGLFKGGGV
CINCQQNTAGVNCETCKDGYYKPSEVSPYSDFPCVECRCNPAGSESQVCSRDDSEPGQCE
CKEGFTGHRCDHCAFGYSDFPHCVQCKCNPAGSTNSDLCGPCTCKVNVMGVHCDLCKPGF
YNLQESNALGCTKCFCFGVSDVCESSGWATAQTIFRDGILHPPDSFQLPHIDGNKLTINN
NTLSGKNHQKVLWWVAPKAFIGSKLVSYGGFLNFSVVYDIPLDNKYQVLPAYCDILIEGN
GQALHLLHPLVLLLSPLAENMVAVEILPQQFVDDQNGAQVSRDDLLLVLTNMTLLLVRIH
LNTSAEGQIRLSSVSLDFADSRSSSGIQAVAVELCECPWGYSGTSCEDCAAGYFRQTESE
LSLNNQKLIYVHPCIPCHCNNHSEMCDPKTGVCQNCQHHTSGQHCELCASGYYGNITGSI
SDCSLCACPLLDNSFSPTCVSDGVGEFRCTSCQTGYEGRYCERCSVGYYGNPSLPGRGCS
QCSCSGWGSRHLKCDQLSGYCECKAGVRGQSCDQCDEHHILQLGECLSCNDSCTGLLLQD
LDKLNDYVLSFNLSNFVMAPYWHLVLLENQTRHLEAELSLKTSEMSCLSQADEDLNHVTS
DLSALLQRVQNQSDNLVKVEISTNSLAHGALLLDNISSLQDLIHELENETRLVDWTEQTV
TSAHQMHLLEEMESMLRTIRGVNLTEAKATVSQELGFSESLMNKLQGIILSNQTENEKRL
CLLITSLDDTMTTLQHAHTQLQNAAQLNTEADHLLKVVQNQLHQYQSVHQNLSLGFGSVD
GLLEDSQVLLEDIIRLSEELTNGSTVELLASQLDRWQLLLRKHVDTLVAGMKMTDALKNI
YRAESHAYDIQSHAQSMHSSTMVVCNVSQNTSQLAHLDKNITGNINSAHQMTLVAHNSAS
LAVNMIIQSKQALSEEGRAKRNITSAVLDKSQKMLILAADLQLNISKVTSRLQLVKNGVF
NFSLLLNQSINDLQTFPKGSMVSLQQAQDQTAATRSDIKESLLQLHRLTQQLQNSSSVVD
HTNTTVRETNHLMAHTQTAVNEVQQKLQDAEHRTRHLIEKIKPLSMLGNMLKKNLSNIRE
LIDQARKQAALIKVAVQADRDCVRSYRPQIQSSNFNTLSLMLKTSSPDNLLFYLGSNTTV
DFLAVEMHDGKVSLLWNVGSGTTRLEIPGTDISNNRWTRINATLIGAHGTLSVHQVDSEL
APGPGITRTSPGTSQVLDINRNTVIHIGGLGVHTQIPAGLHSSSFQGCLGEVMLDGTNIG
LWSYNKREGKCGGCFSSPQAEETSFHFDGSGFSVVHKSLKATSTSIVMLFKTLSPSGLLL
YLASINMRDFLSLELVEGHVCLTFDLGSGALIQTSNRRYNTGVWYKITLQRNKQKGYLSI
MAEDQSSDKEVLEAESPGTASDLNRSDLDPVYIGGLPSSTPVRQQVVSRSYVGCIKNVEI
ARSNFDLLRDAYGVQKGCLLTAVRSVSILPGGFVQIPPPSFSEEVELLLTFSSNKQSGLL
LAAFGKDRTHKQHFLSVHLVSGAVEVELGGVFGATGAVTVMKSDEGSFSEGKKHSVIVSI
NRKSLSLQVDDGHLKSVSLMSEVPFSQLSPLSLFVGGVPPENKTCLPIRLRALSRSFRGC
IQHVVMDRIPVDLSAAVRYEGAELNSCLFEERGRRAMLPENQDVESASDPVDLPLAQPKH
QSVSTPQTLQCVSDENPTFLPSAAQFGLSRHSHMTFINPRTAQKSISMRLVLRSRGLEGL
IILLSYSKLMDFVALSLKEGRVRLSTDFGKGPASIASSLVINDGEWHDVRVEVNRRSMWV
SVDGSPPEPITIKGHRLDVDKRLYLGGLPHGVSSRRINVSRSFPGCVQSVILNGAMLELS
KANSKLHVSSCFTKDQAGSYFNGSGYAELMHDGYKVGSDLSVSLEFQTSQSEGVFLGISS
AKVDAIGLEMIDGQVVFSMNNGAGPVSVRSTGQMLCDGQWHHLLVRKTKHVLILSVDGQR
YTTPNPYPQSTSAETNNPVYLGGYPANVKQNCLTISSRFRGCLRNLQLIKSHLSVXADLS
SAYFLLGVTPESCPGA
NT seq 7251 nt   +upstreamnt  +downstreamnt
atgaaacttttgctgctgctgctgctgtttctgatgcagcaagctgcagctcagcagaga
ggactttttccagccatctttaacctggccactaatgcagagatcagcagcaacgccaca
tgtggagctccagagccagaagtttactgtaaactggttgaacatgttccgggtcgtaga
atgaaaaactcacattgctcaagatgtgacgccaactccgtccagtccaaagaacgtcat
ccaatcacaaatgcgattgatggaactaaccggtggtggcaaagtccaagtatcaagaat
ggaccccagtttcactggatcaccattaccctggatctgaaacagatttttcaagttgcc
tacattataataaaagcagccaactctccacgaccaggtaattggatcctagaacactct
ttagatggagtgacctttgacccctggcagttttatgccattggtgattcagaatgtttg
tctcgttacaacatcactccccgactcgggccgcccacctacaggagtgacattgaggtc
atctgtacttcctactactccaaactgaacccactggaacaaggagagattcacacatcc
ttaattaatggacgtcccggagccgatgatttgacccctgatcttctgaactttacatca
gctcgttacatcagactgagacttcagcgaataagaactcttaatgccgacctcatgaca
ttaagcacccatgacccacaagacattgacccaattgtgaccaggaggtatttctactcc
atcaaagatatttctgtgggtgggatgtgcatctgctatggacatgcccagagctgccca
ttagatctggttacaaagaagctacagtgtgtgtgtgagcacaacacctgtggagaaaac
tgtaatgactgctgccctggttaccatcaggtgccttggaaaccaggaactatctctgag
agaaacacctgtgaaaagtgcaactgtcacaacaaagccatagactgtttttacaatcag
actgtttctgaactctctttgagtttgaacactcatggtctgtttaaaggaggtggggtt
tgtataaactgtcagcaaaacacagctggtgtcaactgtgagacctgcaaggatggctac
tacaaaccctctgaggtgtctccatactcagatttcccgtgtgtggagtgcaggtgcaat
ccagctggatcagagtcccaagtctgcagcagagatgactcagaaccaggccagtgtgaa
tgtaaagagggcttcacaggtcatcgatgtgatcattgtgcatttggatacagcgatttt
cctcattgtgttcaatgcaagtgtaacccagcaggtagcaccaactctgacctttgtggc
ccctgtacctgcaaggtgaacgtgatgggagtccactgtgatctatgcaaaccaggtttt
tacaacttacaggaaagcaacgctctcggatgtaccaagtgtttttgttttggtgtttct
gatgtctgtgagagttctggctgggccacagctcagactatttttagagatggaatactt
catccgcctgattctttccaactcccacacattgatggaaataaactcacaattaacaac
aacactttgtctggcaaaaaccaccagaaggtgctgtggtgggtggcacctaaagctttc
attggcagcaagctggtatcttatggagggtttctcaatttctctgtggtttatgatatt
ccattggacaacaaataccaagttctgccagcctactgtgacatcctcattgaggggaat
ggtcaagctcttcatctcttgcatcctctcgttctcttactctcccctctggctgaaaac
atggtggctgtggaaatacttcctcagcaatttgtggatgatcaaaatggtgcacaagtt
agtcgtgatgatctgctgttggtgttaactaacatgacattactgttagtcagaattcac
ctgaacacctcagctgaaggacaaatacggctcagctcagtctctttggactttgcagat
tccaggtcaagttctggcattcaggcagttgccgtggagctgtgtgaatgtccatggggt
tatagcggcacttcctgtgaggactgtgcagcaggttatttccggcagactgagtctgag
ttgtctctgaacaaccaaaagttgatctatgttcatccatgcattccatgtcattgcaac
aaccacagtgaaatgtgtgacccaaagactggagtgtgtcagaattgtcagcaccacacc
agtgggcagcactgtgaactttgtgcctcagggtactatgggaacatcactggatccatc
agtgactgttctttgtgtgcctgccccctactggacaacagtttcagtcccacctgtgtg
tctgatggagttggagagttccgctgtacttcctgtcagacaggatatgaaggcagatac
tgtgagaggtgttctgttgggtattatggtaacccttcacttccaggacgtgggtgttca
cagtgcagctgcagtgggtggggctcccgccatctcaagtgtgatcagctcagtgggtac
tgtgagtgtaaggctggggtcagaggtcagtcatgtgaccagtgtgatgagcaccacatc
ctgcagctgggagagtgtttgtcatgtaatgacagctgcactggccttctgctccaagac
ctggacaaattaaatgactacgttctgtctttcaatctgagtaacttcgtcatggcacca
tattggcacctggtgctgctggagaatcaaaccagacatttagaggctgagctttctttg
aaaacatctgaaatgtcatgtttgtctcaagcggatgaggatttaaatcatgtgacttct
gatctcagcgctctgctacagcgggtccaaaatcaatctgacaacctggtgaaagttgaa
atctccaccaacagtttggcccatggtgcactgctgcttgacaacattagcagccttcaa
gacctcattcatgagttagagaacgagacaagacttgtggactggacagagcagacggta
acatcagcccatcaaatgcatctattggaagagatggagtccatgctgcgaaccatcaga
ggtgtcaatctgacagaagccaaggcaacagtcagtcaggagcttggtttttcagagtcc
ctcatgaacaaactgcaggggattatattatctaaccagactgagaatgagaagagactc
tgcctcctcatcacctctctggacgacaccatgacaactctgcaacatgcacatactcaa
ctacagaatgctgcacagctaaacacagaagcagatcacctgctgaaagttgtacagaat
cagctgcatcaatatcagtctgttcatcagaacctcagtttggggtttggatccgtggat
ggactactggaggacagccaggtgctgctggaggacatcatacgtctaagcgaggagtta
accaatggcagcacagtggagctgttggcgtctcagctggatcgttggcagcttttactc
aggaaacatgtggacactctagttgctggaatgaaaatgacagatgctcttaaaaacatt
tatcgtgcagagagtcatgcctacgacattcaaagccacgcccaatccatgcacagctcc
acgatggtggtgtgtaacgtgtcccagaacaccagccaactggctcatcttgacaagaac
atcacaggaaacattaactccgcccaccagatgaccttggtagcccacaactctgcctcc
ctcgctgtcaatatgatcatccaatcaaagcaggctctttcagaggagggcagggccaaa
cggaacatcacctctgctgttttagacaaaagtcagaagatgctaattttggctgcagat
ctgcagctgaatatttccaaagtaaccagcagactacagctggtcaaaaatggtgtattt
aacttcagcctccttctcaatcaatccatcaatgatctacaaacctttcctaaaggttca
atggtgtcacttcaacaggctcaggatcagactgcagcaactcgctctgacattaaggag
tcactgcttcagctgcacagactcacacagcagctgcagaattcttcttctgtagtggat
cacactaacaccacagtgagggagacaaaccacctgatggctcacacacaaactgcagtc
aatgaggtgcagcaaaagctccaagatgctgagcaccgtacacgacatctgatagagaaa
ataaagccgctgagcatgctgggaaatatgctgaagaagaacctctccaacatcagagaa
ctaattgatcaggcccgaaaacaggcagcattgataaaggtagcagtccaggcygacaga
gactgcgttcgatcctacagacctcagatccagtccagtaacttcaacactctgagtcta
atgctgaagacctccagtccagataacctgctcttctacctgggcagcaacactacagtg
gacttcctggctgtagagatgcatgatgggaaggtttccctgctttggaatgtgggttct
ggcaccacacgactggagattcctggaactgacatttccaacaacagatggaccagaatc
aatgctaccctgattggggcccatggtaccctgtctgtccatcaggtggactctgagttg
gctccaggacctggaataacaagaacatcaccaggaacatcacaagttttagatatcaac
agaaacacagtgatccacattggtggactgggagttcacactcagattcctgcagggctg
cactcatcctcattccagggctgcctgggtgaagtcatgctggacgggacaaacattgga
ctgtggagctacaacaagcgagaggggaagtgtggaggctgcttcagcagtccccaagca
gaggagacatccttccacttcgatggttctggtttctctgtggtccacaagtctctgaaa
gcaacatccacttccattgtgatgctgtttaaaactctgtctccaagtgggctgctgctg
tacctggcttctatcaacatgagggacttcttgtctttggagctagtagaggggcatgtc
tgtctgacctttgacctgggatcaggtgctttaatccagacctcaaacaggaggtacaac
acaggagtttggtacaaaatcacactgcagaggaacaaacaaaaaggttacctgtctata
atggcagaagaccaatcatcagataaggaggttttggaggcagagtctccaggaacagct
tctgaccttaaccgctctgaccttgacccagtctatatcggaggacttccgtcttccaca
ccagtcagacaacaggttgtttctaggtcatatgttggctgtataaagaatgttgagatt
gcccgttccaactttgacctgctgagagatgcatatggagtccagaaaggttgccttctc
acggcggtgagaagtgtgtccattttgcctggaggctttgtccagatacctcctccatca
ttcagtgaggaggtggagcttctccttaccttttcctccaacaagcagtcaggactcctt
ctggctgcctttggtaaagaccgaacacacaaacagcacttcctgtcagttcacctggtc
tcaggtgctgtagaggtggagcttgggggtgtatttggagccactggtgccgtcacagtg
atgaaatctgatgaaggatctttcagtgaaggaaaaaaacactctgtgattgtttctatc
aacagaaaatctttgtccttgcaggtggatgacggacacttaaaatctgtttctctgatg
tcagaagtcccgttttctcagttgtcccccttatctttattcgttggtggtgtcccacct
gagaacaagacctgtctgccaatcagattgcgtgctttaagcaggtcatttagaggttgc
atccaacatgtagtgatggacagaatacctgttgacctatcagcagcagtcaggtatgag
ggcgcagagcttaacagttgcttatttgaggagaggggtagaagggcaatgcttcctgaa
aaccaggatgtagaatcagcatctgaccctgtagatctgcctttagcccaacctaaacac
caaagtgtatccacacctcaaactttacagtgtgtttcagatgaaaatcctacctttctg
ccatcagcagctcagtttggtttatccagacacagtcacatgaccttcatcaaccccaga
acagctcagaaaagtatatccatgaggttggtacttcgaagccgtggtctggaaggactg
ataattcttctctcttactccaaactgatggactttgtggccctcagtctcaaagagggc
cgtgtcaggttgtcaactgactttggaaaaggccccgcctctattgcctcatctcttgtt
attaatgatggcgagtggcatgatgtcagggtggaggtgaaccgacgatcaatgtgggtt
tctgttgatggttcacctccagagcccatcacaatcaaaggacaccgcctggatgtggac
aagagactgtacctgggagggttacctcacggagtgtccagcaggaggatcaatgtcagc
agaagctttccaggttgtgttcaatctgtcattctgaatggtgccatgctggaactttcc
aaagcaaattcaaagcttcatgtttcttcctgctttaccaaagaccaggcagggagttat
ttcaatggcagtgggtatgctgaactaatgcatgatgggtataaagttggctcagacctg
tctgtgtctctggagttccaaacaagccagtcagaaggtgtatttctaggaatcagcagt
gcgaaggtggatgctattggactggaaatgattgatggacaggtggtgttcagtatgaat
aatggtgctggtccagtttcagtgcgttccactggtcagatgctgtgtgatggacagtgg
catcacctgctggtcagaaaaactaaacatgtcctgattttgagcgtagacgggcaaaga
tacaccacccccaacccctatccacaatccacctctgctgagaccaacaaccctgtgtac
ctgggaggatatccagcaaatgtcaaacagaactgtctgaccatcagctctaggttcaga
ggttgcctgaggaacctgcagcttattaaatcccatctgagtgttaytgctgaccttagc
tccgcctacttcctgttgggcgtcactcctgaatcttgccctggggcctag

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system