KEGG   Algoriphagus sanaruensis: AO498_12970
Entry
AO498_12970       CDS       T04334                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
alm  Algoriphagus sanaruensis
Pathway
alm03030  DNA replication
alm03430  Mismatch repair
alm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AO498_12970
   03430 Mismatch repair
    AO498_12970
   03440 Homologous recombination
    AO498_12970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alm03032]
    AO498_12970
   03400 DNA repair and recombination proteins [BR:alm03400]
    AO498_12970
Enzymes [BR:alm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AO498_12970
DNA replication proteins [BR:alm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AO498_12970
DNA repair and recombination proteins [BR:alm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AO498_12970
SSDB
Motif
Pfam: RNase_T GIY-YIG Rv2179c-like GIY_YIG_2 DEDDh_C DNApol_Exo DUF6438
Other DBs
NCBI-ProteinID: AMQ57353
UniProt: A0A142EQE8
Position
complement(2951125..2952513)
AA seq 462 aa
MQFAIVDIETTGGAPSGGGITEIAVVLHDGEKITGEFQTLLNPQQYIPGFITGLTGIDQQ
MVADAPVFEEIADELWELLKDRVFVAHNVNFDFSFIREAFSKNGKTWNPPRLCTVRMARK
AIPGMGSYSLGRLCESLRIPILARHRAMGDAKATAILFDKIIREKSDIVYSSLKKNSGES
YLPPNFPLSKFRQIPEACGVYYMLNAKGKVIYVGKANNIKERFKGHFSGKVLPQLKQKLK
EEVTDLKWQITGSEFMALLIEMLEIKRIWPIYNSALKSPKSLWGIFHYQDGSGFSRFQIS
KTTKNLRPLETFFSQEEAKQYLQSATETYQLCGKLNGLHKVSCNHLNGATCLGACFSNES
PKSYNQRAEEWVQLLSTSKKDILIKLEGRSKDEVAACVFSGGVLTRYGFVASTEVEIEQL
EKVNPVPETFYILRQYLHQFDLSQITVLERKIEESPWILNFG
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgcaattcgcaatcgtggatattgaaactacaggtggagcaccttcaggaggagggatc
actgagattgcagttgtgcttcacgatggggagaaaatcacaggtgagtttcaaacttta
ctcaatccccagcaatatatcccgggatttatcaccggattaaccggaatagatcagcag
atggtcgccgatgcaccggtatttgaagaaatagcggacgagttatgggaactcttgaaa
gatcgagtgtttgtggcccataatgtcaattttgatttcagttttattcgggaggcgttt
tccaaaaatggaaaaacatggaatccaccacgattatgtaccgtgagaatggctcgaaaa
gctatccctggaatgggttcgtatagtttggggagattatgcgaaagtctccgaattccc
attttggcacgtcaccgagctatgggagatgcaaaagctaccgccattctttttgataag
atcattcgggaaaaatccgatatcgtctattcctctttgaaaaaaaacagtggggaatcc
tatcttccgcccaatttcccattatcaaaattccgtcaaattccggaggcctgcggggtt
tattacatgctcaatgccaaaggaaaagtgatctatgtgggaaaagccaataatatcaag
gagcgatttaaaggtcatttttcgggaaaggtgttgcctcaactcaagcaaaagcttaag
gaagaagtaaccgaccttaaatggcaaattactggttccgagtttatggctttgctcatc
gaaatgcttgaaatcaagcgaatttggccgatttataattcagcgctcaaaagccctaag
tcgctttggggtatttttcattatcaagatggatcaggcttttcaagatttcaaatctcc
aaaaccaccaaaaatcttcgccctttggagactttttttagtcaagaagaagccaagcaa
tatctgcagtctgccactgaaacctatcaactttgtgggaagctcaatggcttgcataaa
gtatcttgtaaccatttaaatggggcaacttgccttggggcttgtttctcaaatgaatca
ccgaaaagctacaatcagcgagcagaagaatgggtccaacttctaagtacttctaaaaaa
gatattttaatcaaactcgagggaagaagtaaagatgaagttgccgcctgcgttttttca
ggcggtgttttgacccgttatggtttcgtcgcttcaactgaagtggaaatcgagcagttg
gaaaaagtgaatccagtccctgagacattttacatcctcagacaatacctccatcaattt
gacctcagtcaaatcactgttttagaacgaaaaatagaggaatcgccttggatattaaac
tttggttag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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