KEGG   Alloactinosynnema sp. L-07: CRK58520
Entry
CRK58520          CDS       T04489                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
alo  Alloactinosynnema sp. L-07
Brite
KEGG Orthology (KO) [BR:alo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:alo03016]
    CRK58520
Enzymes [BR:alo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     CRK58520
Transfer RNA biogenesis [BR:alo03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    CRK58520
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: CRK58520
UniProt: A0A0H5D1U4
Position
I:complement(3738787..3739233)
AA seq 148 aa
MRLFSAFPLPDEVADHLADHLPKMPGRPTARHTWHITVVYYGESTPPLIPATLRAPRLRL
TGSGSFPGVAWVGVETTPELHAIVKAAGGDPEDYIPHVTLARWPKRHRASFEADYTGPEW
IPTELVLYRSDPGPVYTPIHQVGLLHAE
NT seq 447 nt   +upstreamnt  +downstreamnt
atgaggctgttctccgcgtttcccctgcccgacgaggtcgccgaccacctggccgaccac
ctccccaagatgcccggacgcccgacggcccggcacacctggcacatcaccgtcgtctac
tacggcgagagcaccccgccgttaattcccgcgacactccgagccccacgccttaggctg
accgggtcgggatcgtttcccggagtcgcctgggtcggtgtcgaaaccacacccgagctg
cacgcgattgtgaaagccgcgggcggtgaccccgaggactacatcccgcacgtgactctc
gcccgctggccgaaacgccaccgggcgagcttcgaggccgactacaccggacccgagtgg
atcccgaccgaactcgtcctctaccgcagcgacccagggccggtgtacacgccgatccac
caggtcggactgctccacgcggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system