KEGG   Poseidonibacter parvus: LPB137_08665
Entry
LPB137_08665      CDS       T04722                                 
Name
(GenBank) D-amino-acid oxidase
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
alp  Poseidonibacter parvus
Brite
KEGG Orthology (KO) [BR:alp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:alp03016]
    LPB137_08665
Enzymes [BR:alp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     LPB137_08665
Transfer RNA biogenesis [BR:alp03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    LPB137_08665
SSDB
Motif
Pfam: DAO Pyr_redox_2 NAD_binding_8 FAD_binding_2 Thi4 Pyr_redox FAD_binding_3 GIDA HI0933_like GDI Lycopene_cycl TrkA_N MurD-like_N Pyr_redox_3 FAD_oxidored
Other DBs
NCBI-ProteinID: APW65923
UniProt: A0A1P8KN21
Position
complement(1740164..1741345)
AA seq 393 aa
MLNNYEEFDYVIVGAGIAGCSTAYFLSKYSKSVLLVDKNKEIAFGASGAAGAFLSPLLGK
PNVFKDLITKSLKFSTSFYKEINSISFQNNGVCRIPKNEEDREKFKSYIPYMDFEYKALD
DGYFFDIGSWINPSEVCNLLVENIKKKLNYSIDTIIKEDDVWFLNNEIKTKNLILCTGAN
TKLIEEKYFDIRAVWGQKIDVLSSTCVGFNYHKACSISKAVKTDKENLFKLSIGATHHRF
NCNKDICNYCVEVANLNNDCSKCYTENIVNQDCQELIKLANNIVKLNDVKVVDVKIGARA
SSPDYFPMLGKLIDSKKSFEKFPHLKNGTHIKEKMLDKIENLYILNGVGGRGFVLSPYLA
NELVEHIINAKEIDESISTYRLFKRWAKKQKNN
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgcttaataactatgaagaatttgactatgttatagtaggagctggaattgctggatgt
agtacggcatattttttatctaagtattctaaatctgttttattagtagataaaaataaa
gaaatagcctttggagcaagtggagcagctggtgcttttttatctccacttttaggaaaa
ccaaatgtatttaaagatttaataacaaaatctttaaagttttcaactagcttttataaa
gaaataaatagtatatcttttcaaaataatggggtgtgtagaataccaaaaaatgaagaa
gatagagaaaagtttaaatcatatattccatatatggattttgaatataaagctttagat
gatggatatttctttgatattggttcttggattaatcctagtgaagtttgtaatttatta
gttgaaaatatcaagaaaaagctaaattatagtattgatacaattataaaagaagatgat
gtttggtttttaaacaatgaaataaaaacaaaaaatcttatactttgtacaggtgctaat
acaaaattaatagaagaaaaatattttgatattagagcagtttggggtcaaaaaattgat
gttttatcaagtacttgtgtaggttttaactaccataaagcatgttctatatctaaagct
gttaaaacagataaagaaaaccttttcaagttatcaataggtgcaacacatcataggttt
aattgcaataaagatatttgtaattattgtgttgaagttgcaaaccttaacaatgattgt
tctaagtgttatacagaaaatatagtaaatcaagattgccaagaattaataaaactagct
aataatattgtaaaacttaatgatgtaaaagttgttgatgttaaaataggtgctagagct
tcaagtcctgattattttccaatgttagggaaattgattgattcaaaaaagagttttgaa
aagttcccacatttaaaaaatggaacgcatataaaagaaaaaatgcttgataaaattgaa
aacctttatattttaaatggtgtaggtggtagaggttttgtattatcaccatatttagca
aatgaattagtggagcacataataaatgctaaagaaattgatgaatcaatctcaacttat
cgtttatttaaaagatgggctaaaaaacaaaaaaataattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (53)   

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