KEGG   Alteromonas sp. RKMC-009: DS731_15650
Entry
DS731_15650       CDS       T05653                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
alr  Alteromonas sp. RKMC-009
Pathway
alr00300  Lysine biosynthesis
alr00550  Peptidoglycan biosynthesis
alr01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:alr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    DS731_15650
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    DS731_15650
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:alr01011]
    DS731_15650
Enzymes [BR:alr01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     DS731_15650
Peptidoglycan biosynthesis and degradation proteins [BR:alr01011]
 Precursor biosynthesis
  Amino acid ligase
   DS731_15650
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: AYA65336
UniProt: A0A385MY91
Position
complement(3501086..3502612)
AA seq 508 aa
MVVNAFEQSLSVLLAKFGITAPDVRIQGLTLDSRRVTPKLAFVAVKGHSMDGREFIPQAI
SLGAKAILAQTEKVREHGRMEMRGTTIIVHLYELTDILSSLAGAFYDYPATKMQSVAVTG
TNGKTSVVQMLSQLTTAGGTRCAAVGTLGAGLFQGADTEWEPTPAGNTTPDAIRMQYLLA
EFVQQNARQVAFEASSHALVQGRLSQIKTDIVVFTNLSRDHLDYHGTMEDYGAAKRLAMQ
LPGVSTVVLNADDPESDRWHTNKPSGVTTVWYGMSELAAQKSEDRHCLATNVKYHPDGCQ
FRLVSSWGSRDIQVPLLGAFNVHNLLAVISVMLVQGLRFEEVVALLPKVSPVAGRMEVFP
FTAHANVIVDYAHTPDALEKALLSTRAHTPGDVWCVFGCGGDRDKGKRPLMGQAAEAVAD
HLVITTDNSRSEAPEDIARDIREGLTQPQRAVDEPDREKAIRHCLEKAAPEDLILVAGKG
HEDYQIIGEQKKNYNERAVVARLQREYS
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggtagttaatgcatttgaacaaagtttaagcgtgttgctggcaaagttcggtattaca
gcgccggatgtccgcattcaggggctgacgctggatagccgtcgggttaccccgaaactg
gcctttgtggcagtaaaaggacacagcatggatggccgggaattcattccgcaggccatc
agtctcggtgccaaagccatacttgcgcaaaccgaaaaagtgcgggagcacggccgcatg
gaaatgcgtggcaccacgattattgttcatctgtatgaattaacagacatcctgtcatca
ctggccggggcgttttacgactatcccgccaccaaaatgcaatctgttgctgttaccggt
accaacggaaaaacctccgtcgtgcaaatgttatcccaacttactaccgccggcggaaca
cgctgtgcagcagtagggacgctgggtgcaggcctgtttcagggtgcagatacagagtgg
gaacccacacctgccggcaataccacccctgacgctatccgcatgcagtatttattggca
gagtttgtgcaacaaaacgcgcggcaagtggcatttgaagcgtcttctcatgctctggtg
cagggaaggctcagtcagatcaagacggatattgtggtgtttaccaacctgtcgagagac
catcttgactatcacggcaccatggaagattacggtgcggccaagcgtctggccatgcaa
ctgccgggcgtcagcacggtagtactgaatgccgatgatcctgaaagcgaccgctggcat
accaacaagccctccggtgttaccactgtgtggtacggcatgtcggaattggcagcgcaa
aagtcagaagatcgccattgtttggccacaaatgtgaaatatcatccggacgggtgtcag
ttcagactggtatcaagctggggaagccgggatattcaggtgccgcttctgggagcgttc
aacgtgcacaacctgctggctgtgatttcagtgatgctggtgcaggggcttcgttttgaa
gaagtggtggcgttgttaccaaaggtttctccggtagccggaagaatggaagtatttcct
tttaccgcgcatgcgaatgtcattgtggactatgcccatactccggatgcgctggaaaag
gcgttactaagcacaagagcgcataccccgggggatgtgtggtgtgttttcggatgtggc
ggcgaccgtgataaaggcaagcgtcctcttatgggacaggccgctgaggctgtagccgat
catcttgtcatcactaccgataacagccgttcagaagcgccggaagatatcgcccgtgat
atccgtgaaggactgacacagccacaacgtgcggtggatgagccggacagagaaaaggcc
attcgccactgcctggaaaaggcagcaccggaggatttgatcctcgtggcgggtaaaggc
catgaagattatcagatcatcggtgagcaaaagaaaaattataacgagcgggccgtggta
gcacggctgcaaagggagtacagctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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