KEGG   Alteromonas sp. RKMC-009: DS731_17980
Entry
DS731_17980       CDS       T05653                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
alr  Alteromonas sp. RKMC-009
Pathway
alr03030  DNA replication
alr03430  Mismatch repair
alr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DS731_17980
   03430 Mismatch repair
    DS731_17980
   03440 Homologous recombination
    DS731_17980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alr03032]
    DS731_17980
   03400 DNA repair and recombination proteins [BR:alr03400]
    DS731_17980
Enzymes [BR:alr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DS731_17980
DNA replication proteins [BR:alr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DS731_17980
DNA repair and recombination proteins [BR:alr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DS731_17980
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like
Other DBs
NCBI-ProteinID: AYA65753
UniProt: A0A385MZV8
Position
complement(4080729..4081403)
AA seq 224 aa
MLSMLKRWLAGAPPLPEGWAEKSLATLPLLAVDLELTSLDVREAQITSAGWVEGRGSHID
ISRCFYSVVRTRADLAQSPVIHGLTGADIAQGAHIKEVLEQLVGYAGTHLWVCHNANLDL
SVLQAALSAQQISCPPVVVLDTLKLAVYQLKKHHEVLPPNSATLAVCRQRLGLPAAPAHN
ALDDAMATLQLWFAQNQVLNGGKVVSVGDLLHTQAISCKKMEKN
NT seq 675 nt   +upstreamnt  +downstreamnt
atgctgagtatgttaaagcgctggctggcaggagccccgccactgccggaaggctgggcg
gagaagtcgctggcaacactgccgttgctggccgttgatctggaactgacatcactggat
gtccgtgaagcgcaaattacctctgccggctgggtagaaggacggggaagtcacatagat
atcagccgttgcttttattcagttgtcagaacccgtgcggatcttgcccaaagcccggtc
atccacggtcttaccggtgccgacatagcgcagggggcgcatattaaagaggtactggag
caactggtcggttatgccggaacgcatctgtgggtatgtcacaacgctaatctggattta
agcgtgttacaggcggcattgtcggctcagcaaatatcctgtccgccggtggtggtactg
gatacgttaaagctggcagtctatcaacttaaaaagcaccatgaagtactgccgccaaac
agtgcaacgttagcggtttgccggcagcgcctggggttacctgcagcaccagctcacaat
gcgctggatgatgccatggcaaccttgcaactctggtttgcgcaaaatcaggtgctgaat
ggcgggaaagtagtcagtgttggcgatttactgcacactcaggccatttcttgcaaaaaa
atggaaaaaaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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