KEGG   Anaerohalosphaera lusitana: STSP2_03057
Entry
STSP2_03057       CDS       T06331                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
alus  Anaerohalosphaera lusitana
Pathway
alus03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:alus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    STSP2_03057 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:alus03021]
    STSP2_03057 (rpoB)
   03400 DNA repair and recombination proteins [BR:alus03400]
    STSP2_03057 (rpoB)
Enzymes [BR:alus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     STSP2_03057 (rpoB)
Transcription machinery [BR:alus03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     STSP2_03057 (rpoB)
DNA repair and recombination proteins [BR:alus03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      STSP2_03057 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Peptidase_M23
Other DBs
NCBI-ProteinID: AQT69859
UniProt: A0A1U9NPL8
Position
complement(3666174..3669932)
AA seq 1252 aa
MKFLPVRNFGKIGDATDVPDLVEIQRASYSRFLQENVSPDDRTDSGLEALLREIFPIVSY
DKTAELEFMSYELERPRYTPEQCRELRLTYGYPLKIHCALKRSNADDIAEQGIYLGEMPV
MIGGGEFIVNGAERVIVNQLHRSPGVDFGIESKESGDRILHGCRIIPERGSWIEMSVTRK
DVLVVRIDQSSKIPATTFLRAMSEDMGTTEQIIRLFYDVKSVDTGKLDPSMWSVGPIVDT
ETGEILVEAGCQLGDMVGQIQASSLDKIEVIKRVQDPLILNTIAEDDCENHEDALLKLYV
KLRPGNPAQIDKAKQLFAEKFFDENRYRLGRVGRFRINRKFDQDLAESKMTLRPEDFLNT
MKYIVGLRNGKGEIDDIDHLGNRRLRTIDELAADEIRKGLLKLRRTVQERMSMKSPGDIK
RIADLVNSKSVSSSIEYFFGRGELSQVVDQTNCLSQLTHERRLSALGPGGLNRKRAGFEV
RDVHISHYGRVCPIETPEGTNIGLIVSLGIFSKVDEYGFLLTPYRKVENMKVTDEIAYMR
ADEEMKAVFAPPGMVDPKSNELRKGLVLARKGGDLTQAPREEVDFVDISPKQTVGVSASL
IPFLEHDDANRALMGSNMMRQSVPLLETEPPLVGTGMEEIVAKNSSMVVRATNDGVVTAV
DANKIVVNDTDEYDLIKFQGLNERTCLTQTPRVKLGEEVKAGDIIADGGGTANGVLSLGK
NVCVAFVPFDGYNFEDAIIISERLVKDDVFTSIHIDEFSVDIRETKLGREEFTRDIPNVG
EKVLRNLDENGIIREGTRVGPGDILVGKVSPKSKTELTPEEKLLHAIFGRAGEDVKNDSL
EVPSGFEGTVIKTRRFIRRGGMSDEQKAELKIRMQEYEQEMISKQCALFRRMMREINEQF
GTEIVDPSTLQKAGASDDNDVIEEQIENFQIEWVKPAKLRGQAKDIIEQFWPKIRDLQEE
AKVRLNRMKHGDELPSGVLEMVKVYVATKRVLSVGDKMAGRHGNKGVIAKIMPEEDMPFL
DDGTPVDICLNPLGVPSRMNVGQILETILGWSGKVLGFRANTPVFDGATEDEIQKVTVEA
NDYVRQQMQMFETDKKAPPAGGLRVEVPESLKVQLYDGRTGEPLEQQTTVGFMYMLKLHH
LVDEKIHARATGPYSLITQQPLGGKARTGGQRFGEMEVWALEAYGASYTLQELLTVKSDD
IEGRTKIYESMVKGMNTLEAGTPISFDVLCNEIRGLGLNISLEKKRVGNKPL
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgaagtttttgcctgtccgtaattttggaaagatcggtgacgcaacagatgtgccggat
ctggtagagattcagcgtgcaagttacagccggtttttgcaggaaaatgtttcgcccgat
gatcgcacagacagcgggctggaagcactgcttcgcgagatattcccaattgtcagctat
gacaagaccgcagagctcgaatttatgagctatgagctcgagcggcctcgctatacacct
gagcagtgcagggaactccgcttgacttacggttacccgctgaagatacattgcgccctc
aaacgctcgaatgcggacgacattgccgagcaggggatctatcttggcgagatgccggtc
atgatcggcggcggcgagttcatcgtcaacggtgccgagcgtgtgatcgtaaatcagctt
caccgcagtcccggtgtggattttggaattgaaagcaaagaatccggcgacaggattctt
catggctgccgaatcatcccagaacgcggcagttggatagagatgtccgtcactcgcaag
gatgttctggtcgtgcgtattgaccagtccagcaagatccctgcgaccacgttcctgcgt
gcgatgagtgaggacatgggaacgacagagcagatcatccgtctgttctatgacgtaaag
agtgtcgatacaggcaagctggatccgtcaatgtggtcggtaggcccgatcgttgatacc
gagacgggcgagatcctagttgaggccggctgtcagcttggcgatatggttggtcagatc
caggccagttcgctggacaagatcgaagttattaagagagtgcaggacccgctgatcctc
aatacgatcgcagaggacgattgcgagaatcacgaggatgctctgctcaagctttacgta
aaactgcgtccgggcaacccggctcagatcgacaaggcaaaacaactgttcgccgaaaag
ttctttgacgaaaatcgttatcgtctcggacgcgtgggcagattcaggataaacaggaag
ttcgatcaggacctggcggaatcaaagatgacgctcaggccggaggatttcctcaataca
atgaaatatatcgtcggcctgcgtaacggcaagggcgaaattgacgacattgaccatctg
ggtaacaggcgtctgcgtaccatcgacgagctggcagccgacgagatccgcaagggtctt
ctcaagctgcgtcgcacggtgcaggaacgcatgagcatgaagagcccgggcgatatcaag
cgtatcgctgacctggtcaactccaagagcgtctcttccagcatcgaatacttcttcggt
cgcggcgagctcagccaggttgtggaccagacgaactgcctttctcagcttacgcacgaa
agacgtctaagtgcacttgggccgggcggtcttaaccgtaagcgtgctggctttgaggtg
cgagacgttcatatcagtcactacggccgagtgtgtccgatcgaaacacctgaaggtacg
aacatcgggctgatcgtttcgctgggtattttctctaaggtcgatgagtacggcttcctt
ctcacgccttaccgcaaggtcgagaatatgaaggtcaccgacgagatcgcatacatgcgt
gcggacgaggaaatgaaagcggtattcgctccgcccggcatggtcgatccgaagagtaac
gaacttcgcaagggtctggtactcgctcgaaagggcggtgaccttacgcaggctccgcgc
gaagaggtagattttgtagatatttcgccgaagcagactgttggtgtgtcggcatcgctg
attccgtttttggagcatgacgatgctaaccgtgctctgatgggatcgaacatgatgcgt
cagtccgtgccgctgctcgaaaccgagcctccgctggtcggaaccggcatggaagagatc
gtcgcgaagaattccagcatggtcgttcgtgcgaccaatgacggcgtcgttacggctgta
gatgccaacaagatcgtcgtcaatgacactgatgagtacgatctgatcaagttccagggc
cttaacgagagaacctgtcttactcagactcctcgcgttaaactgggcgaagaggtcaag
gctggcgatatcatcgcggacggcggcggtaccgctaacggcgtgctttcgcttggtaag
aatgtctgcgtggcatttgttccgttcgacggctacaactttgaggatgcgatcatcatc
agcgaaagactggtaaaggatgacgtcttcacaagtattcacattgatgagttcagcgtc
gacatccgcgagacaaagctcggccgtgaggaatttacgcgagatattccaaacgtcggc
gagaaggtcctgcgtaacctggacgagaacggcatcatccgcgaaggtacccgcgtaggg
cccggcgatattctcgttggtaaggtttcgccgaaaagcaagaccgaacttacgccggaa
gaaaaacttctgcatgctatcttcggccgggcgggcgaggacgtgaagaacgattcgctc
gaggttccaagcggttttgaaggtacggtcatcaagacccgcaggttcatccgtcgcggc
ggcatgtccgacgagcagaaggcagaactcaagatccgcatgcaggaatacgagcaggaa
atgatctcaaagcagtgtgctctgttccgccgcatgatgcgtgagataaacgaacagttt
ggcaccgaaattgtcgacccgtcgacactgcagaaggccggtgcaagcgatgataacgac
gtcatcgaagagcagatcgagaacttccagatcgagtgggtcaagcccgctaagctccgc
ggccaggccaaggacattatcgaacagttctggcccaagatccgcgatctgcaggaagag
gcaaaggtacgactgaaccgcatgaagcacggtgacgagctgccaagcggtgttctggaa
atggtcaaggtttacgttgccaccaagcgtgtactttcggttggtgataagatggctggt
cgccacggtaacaagggtgttatcgccaagatcatgcccgaagaagatatgccgttcctg
gacgacggaacaccggttgatatctgtctgaatccgctcggcgtacccagtcgtatgaac
gtcggtcagatcctcgagacgatcctcggctggtccgggaaggttctcggcttcagggcc
aatacgcctgttttcgatggtgctaccgaagacgagattcaaaaagtcacggtagaagcc
aacgattatgtccgacagcagatgcagatgttcgagacggacaaaaaggctccgccagcc
ggaggtctgcgagtcgaagtgccggaaagtctcaaggtccagctttatgacggccgaact
ggtgagccgctggaacagcagacaacggttggatttatgtacatgctgaaactgcaccac
ctggtggacgagaagatccacgctcgtgcgacaggcccatacagcctgatcacgcagcag
cctctgggcggtaaggccagaactggtggacagcgtttcggtgaaatggaagtttgggct
ctggaagcatacggagcttcatatactctgcaggaattgctgactgtcaagagtgatgat
attgaaggtcggaccaagatctatgaatcgatggtcaaaggtatgaatactctcgaagcg
ggcacaccgatctcgttcgatgtgctttgtaacgagatcaggggccttggcctgaatatc
tcactggagaaaaagcgggtaggcaataagcctctgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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