KEGG   Allochromatium vinosum: Alvin_0387
Entry
Alvin_0387        CDS       T01168                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
alv  Allochromatium vinosum
Pathway
alv03030  DNA replication
alv03430  Mismatch repair
alv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Alvin_0387
   03430 Mismatch repair
    Alvin_0387
   03440 Homologous recombination
    Alvin_0387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alv03032]
    Alvin_0387
   03400 DNA repair and recombination proteins [BR:alv03400]
    Alvin_0387
Enzymes [BR:alv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Alvin_0387
DNA replication proteins [BR:alv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Alvin_0387
DNA repair and recombination proteins [BR:alv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Alvin_0387
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ADC61346
UniProt: D3RN62
Position
449327..450049
AA seq 240 aa
MRQIVLDTETTGLEPREGHRIIEIGCVELVDRRPTGRNFHEYLNPERQIDAEAEAVHGIS
NAFLADKPRFAERAERLVEYLRGAELIIHNAAFDVGFLDHEFGLWRGAEAPRIADLCTVT
DSLLMARKLHPGQRNGLDALCKRYAIDNSHRTLHGALLDAEILADVYLAMTGGQVSLYLG
GEGMNGSGVGEGPVHRGRLDPERPRLRVVRATQTELEAHRVRLDAIWKASGGCVWLGGTD
NT seq 723 nt   +upstreamnt  +downstreamnt
atgcgtcagatcgtcctggataccgaaaccacgggtcttgagccgcgcgagggccaccgg
atcatcgagatcggctgcgtcgagctggtcgaccgccgcccgaccggacgcaacttccac
gaatatctcaaccccgagcgccagatcgacgccgaggccgaggccgtgcacggcatcagc
aacgccttcctcgccgacaagccgcgcttcgccgagcgtgccgagcggctggtcgaatat
ctgcgcggcgctgaactcatcatccacaacgccgccttcgacgtcggcttcctcgatcac
gagttcggcctgtggcgcggcgccgaggctccgcgcatcgccgatctctgcaccgtgacc
gacagcctgctgatggcgcgcaagctccatccgggccagcgcaacggactcgacgcgctc
tgcaagcgctatgcgatcgacaactcgcaccgcacgctgcacggagcgctgctcgacgcc
gagatcctggccgatgtctatctggcgatgaccggcgggcaggtctcgctgtatctcggt
ggcgagggaatgaacggctcgggcgtgggcgagggtccggtgcatcgcggtcgcctcgac
cccgaacgcccgcgcctgcgggtggtgcgggcgacccagactgagctggaggcgcatcgc
gtgcggctggacgcgatctggaaggcgagcggcggttgtgtctggctcggcgggacggat
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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