KEGG   Allochromatium vinosum: Alvin_2944
Entry
Alvin_2944        CDS       T01168                                 
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
  KO
K10941  sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
alv  Allochromatium vinosum
Pathway
alv02020  Two-component system
alv02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:alv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Alvin_2944
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Alvin_2944
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:alv03000]
    Alvin_2944
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:alv02035]
    Alvin_2944
Transcription factors [BR:alv03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Alvin_2944
Bacterial motility proteins [BR:alv02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    Alvin_2944
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 HTH_50 AAA_5 AAA Mg_chelatase MCM HTH_30 AAA_16 AAA_3 DUF6716 bpMoxR HTH_35
Other DBs
NCBI-ProteinID: ADC63846
UniProt: D3RRD4
Position
complement(3321853..3323220)
AA seq 455 aa
MRIGLYGDESARLATRHVLEFLGCDVRDLASLDPVLNRDLAALWVCDTAAGLERALARCS
GPECPPLVCQPLDGDSVPLTGRAYVAAPPLTPGLVIQILQRLQLESEPEPPSGIDLVGRH
PGMLNVKRLIAQVARTDATVLILGETGAGKEVVARAVHAASSRADRPFVAVNCGAIPGDL
LESELFGHEKGAFTGAFTARAGRFELAGDGVLFLDEIGDMPLPMQVKLLRVLQERTFERV
GSNKPIQANARIISATHRNLEEAVEAGLFRQDLFFRLNVFPIELPSLRERQSDIPLLIAT
LEARLREQGGEPARLTPGVLAHLSRQPWPGNVRELANLLEQLSIMYPDQLVDLAQLPSRF
RPDGLELLPAGLGAPAPPPAGAPPGLGEDLLPPEGREMREYLNDLERRMIQAALEQNGFV
VARAARRLGMRRTTLVERMRKFGLERDARDESSEL
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgagaatcggtctgtatggcgatgagtctgcgcgtctcgccacgcggcatgtcctggag
ttcctgggctgcgacgtgcgcgatctggcgagcctcgatccagtcctgaacagggatctg
gccgcgctctgggtctgtgatacggccgccgggctggagcgtgcgctcgcccgttgttcc
ggtcccgagtgtccgccgctcgtctgtcagccgctcgatggcgattcggtgccgctcacc
ggacgcgcctatgtcgccgcgccgccactgacgccgggtctggtgatccagatcctgcaa
cgtctccagctcgaatccgagccagagccgccgtccgggatcgatctggtcggtcgtcat
ccggggatgctgaacgtcaagcgcctgatcgcgcaggtcgcccgcaccgacgcgaccgtg
ctcatcctcggcgagacgggggcgggcaaggaagtggtcgcgcgcgccgttcatgccgcc
tccagtcgcgccgacaggcccttcgtggccgtcaactgcggagccattccgggcgatctg
ctcgaaagcgaactcttcggccacgagaagggcgccttcaccggcgccttcaccgcgcgc
gccggacgcttcgagctggccggcgacggcgtgctctttctcgatgagatcggcgacatg
ccgttgccgatgcaagtcaagctgctgcgcgtgctccaggagcgcaccttcgagcgtgtc
ggctccaacaagcccatccaggccaatgcgcgcatcatctcggccacccatcgcaatctc
gaggaagccgtcgaggccggactcttccgccaggatctgttcttccgcctcaatgtcttc
ccgatcgagctgccctcgctgcgcgagcgtcagagcgacattccgctgctgatcgccacg
ctcgaagcgcggctgcgcgagcagggcggcgagccggcccggctcacgccgggcgtgctg
gcgcatctgagccggcagccctggccgggcaacgtgcgcgagctggccaacctgctcgaa
cagctctcgatcatgtacccggatcagctcgtcgatctggcgcagttgcccagtcgcttc
cggcccgatggactggaactcttgccggccggactcggcgcgccggccccgcccccggcc
ggtgcgccgcccggactcggagaggatctgctgccgcccgagggccgggagatgcgcgag
tatctcaacgacctggagcggcgtatgatccaggccgcgctcgaacagaacggcttcgtc
gtcgcccgcgcggcgcgccggctcgggatgcgccgtaccacgctcgtcgagcggatgcgc
aagttcgggctggagcgtgacgcgcgcgacgaatcctcggagctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system