KEGG   Acinetobacter lwoffii: FOB21_16435
Entry
FOB21_16435       CDS       T06349                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
alw  Acinetobacter lwoffii
Pathway
alw03030  DNA replication
alw03430  Mismatch repair
alw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:alw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FOB21_16435 (dnaE)
   03430 Mismatch repair
    FOB21_16435 (dnaE)
   03440 Homologous recombination
    FOB21_16435 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alw03032]
    FOB21_16435 (dnaE)
   03400 DNA repair and recombination proteins [BR:alw03400]
    FOB21_16435 (dnaE)
Enzymes [BR:alw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FOB21_16435 (dnaE)
DNA replication proteins [BR:alw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FOB21_16435 (dnaE)
DNA repair and recombination proteins [BR:alw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FOB21_16435 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon DUF4447
Other DBs
NCBI-ProteinID: QGR76082
Position
complement(3135294..3138866)
AA seq 1190 aa
MHFVHLGIHTEFSITESIVRIPDLVKAAEEEQMPALALTDLSNLHAAVKFYGKCLSKGIK
PILGSEIRLNDAEHRMTLLAMTNTGWRNLTELVSEGFISGQQLDIPCVQKQWILNQPEDM
IALLGMHSDVGKMLMSSNPQKAEPLLEEWVEKFGNRVYLALTRTNRPDEDNFILEAVKLA
KKYNIGVVAHNDVHFMTRDDYEAHEARVCIADGYVLGDNRRPKTYSPEQYFKSAEEMTAL
FSDIPSAIENTYHIAKRCNVTLQLGKYFLPDYPIPEGHTIDTFFAHLSKEGLEERLNFLY
PPEQRDEDWPEIRKPYDERIEYEINIINSMGFPGYFLIVMDFIQWSKSNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYELLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLLESLEAEPQLKDI
VTNPSNPDHDDAAEIWEMALKLEGITRNTGKHAGGVVISPTKITDFSAVMCDADGTGRVA
QFDKDDVESAGLVKFDFLGLRNLTVIEDAVKNINKRIKADKPLDIAYIPLEDKDAYLVFA
NANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGDFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQYCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIE
GASKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFLSAVLTS
EMQNTDNVVFLIDDCRKNNLEVLPPSVNMSLYQFHAIDEQTIVYGLGAIKGVGEAAMQSV
IDSRAQEGPFRDLFDFCHRIDLKKINKRTLEALIRSGALDCLGIDRADLMAQLPEAVQAA
EQARSNRETGIMDLFGEVEEVQRKPSKPVKPWADEVRLKGEKDTLGLYLTGHPIDVYRNE
LKAFVPCQINELTPTRRGVTTVFAGLVVDIANFPNRMMMTLDDGTARIEISANHERFNRF
KEIIQLDKVVVIEGEIYEREGFDRPMGRLTKAFSLNEIRQKRANSIKITLTAEHFSKSLS
RDLQQILTPYCNVDMSAHIPVILYLDYPYATTELHLGLNWKVAPLDELLAKLRDYFGKEA
LHIEYQVKSKAAKAVSYEQAKPVDIPPPPADMSMDDALELYQAESQPQYS
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgcactttgttcatcttggtattcatacagaattttcgattactgaatccatcgtacgg
atacctgacttggtcaaagctgccgaagaagaacagatgcctgcccttgcgctcacggat
ctttctaacctgcatgctgccgtcaagttctatggcaaatgtctgagcaaaggcatcaag
ccgattctgggttctgaaattcgcctgaatgatgccgaacatcgcatgaccttattggcc
atgaccaataccggctggcgcaacctgactgaactggtatctgaaggctttatcagtggc
cagcaattggatattccctgcgttcaaaaacaatggattttaaatcagcctgaggacatg
attgccctgctcggcatgcattccgatgtcggcaaaatgctgatgagttcaaatccgcaa
aaagcggaaccgctgctagaagaatgggtcgaaaaatttggtaatcgtgtttatcttgcc
ctgacccgtaccaatcgtccggatgaagacaacttcattctggaagccgtgaagctggca
aaaaaatacaatatcggtgtggttgcacataatgatgtgcacttcatgacccgtgacgat
tatgaagcgcatgaagcacgggtatgtattgcagatggttatgtgcttggtgacaaccgc
cgccctaaaacctattcacctgaacaatatttcaaatctgctgaagaaatgacagcgctg
ttctcggatattccatctgcgattgagaacacctatcacattgccaaacgctgtaatgtg
acgctgcaactgggcaaatacttcctgcctgattatccgattcctgaaggtcataccatt
gataccttctttgcacacttgtccaaagaaggtctggaagaacgcctgaatttcctgtat
ccgcctgaacaacgtgatgaagactggccagaaatccgcaagccttatgatgagcgtatc
gaatacgagattaacatcattaactcgatgggattcccgggctacttcctgatcgtgatg
gacttcattcagtggtcgaaaagtaacggcgttccggtcggtccgggccgtggttcgggt
gcaggttcactggtcgcctatagcttaaaaattaccgatcttgacccgctgcgttatgaa
ctgctgttcgaacgtttcctgaacccggaacgtgtttcgatgcccgacttcgacgtcgat
ttctgtatcgcaggccgtgaccgcgtgattgactatgtagcacgtacctatggccgtgat
gcggtctcccagattgcaacattcggcactatggcggccaaaggtgcgattcgtgatgtt
gcccgcgttttgggtaaatcttatggcttggcggatcgtatctcgaaaatgattccgacc
aagcctttaggtctaagcctgcttgagtcactagaagctgaaccccagcttaaagatatc
gtcaccaatccatccaatccagaccatgacgatgcagccgaaatctgggaaatggcactg
aaactggaaggtattacccgaaacaccggtaaacacgccggtggtgtggtgatctcgcca
accaaaattaccgatttctctgcggtcatgtgtgatgccgatggtaccggacgcgtggca
cagttcgataaagacgatgtcgaatctgcaggtctggtgaagtttgacttcttgggtttg
cgtaacctgacggtgattgaagatgcggttaaaaatatcaataaacgcatcaaagcggat
aaacctttagatattgcttatatcccgcttgaagataaagacgcatatctggtctttgcc
aatgccaacaccaccgcggtattccagtttgaatccgtgggcatgaagaagatgctgaaa
gaggcacgcccgagcaagtttgaagaaattattgccttcgtatcgctgtaccgtccaggc
ccgatggatctgattcctgactttatccaccggatgcatggtggcgattttgaatatctg
catccattgcttgaaggcgtgctagaacccacctacgggattatggtgtatcaggaacag
gtaatgcaggctgcacagtactgtgccggctatacccttggtggcgcggacttgttacgt
cgtgccatgggtaagaaaaaaccggaagaaatggtcaaacagcgccagatctttattgaa
ggtgcatcgaaaaaagacattgatgaagccacggccaaccatatcttcgactatatggaa
aagttcgccggctatggttttaacaaatcgcatgctgctgcctatgctttggttgcctac
cagaccgcatggctgaaagcacattatccggcggaattcctgtctgcggtattgacctcg
gagatgcagaacaccgataacgtggtattcctgattgatgactgtcgcaagaataatctg
gaagttttaccaccgtcagtgaatatgtcgctgtatcaattccatgctatcgatgagcaa
accattgtctatggtctaggtgcgatcaaaggcgtcggtgaagcggcgatgcagtcggtg
attgactcgcgtgcgcaagaaggtccattccgtgacttgtttgatttctgtcaccgtatt
gatctgaaaaaaatcaataagcgtactctggaagcactgattcgttcaggcgcactggat
tgcttaggcattgaccgcgccgacctgatggcgcaactgcctgaagcggttcaagctgcg
gaacaggcacgttccaatcgtgaaaccggcatcatggacctgtttggcgaagttgaagaa
gttcagcgcaagccatctaaaccggtcaagccatgggcggatgaagttcgcctgaaaggt
gaaaaagacacgcttggcttgtatctgactggccacccgattgatgtgtatcgcaatgag
ctgaaagcctttgtgccttgtcagatcaatgagctgacgccgacccgccgtggcgtgacc
accgtgtttgcaggactggtggtggatattgccaatttcccgaaccggatgatgatgaca
ctggatgatggtacggcacggattgaaatttcagccaatcacgaacgcttcaaccgcttt
aaagagattatccagctcgataaagtggtggtgattgaaggcgaaatctatgagcgtgaa
ggctttgaccgtccgatgggacgcctcaccaaagcattcagcctgaatgaaattcgccag
aaacgtgccaatagcatcaagatcactctcacagccgagcatttcagcaagagcttgagc
cgtgacttgcagcagattctgactccttattgcaatgttgatatgtccgcacatattccg
gtgattctatatctggattacccgtatgccacgactgaactgcatctgggtctcaactgg
aaagtcgccccactggatgagctcctagccaaattgcgtgattattttggtaaagaagcc
ttgcatattgagtatcaggtcaagtccaaagctgccaaagccgtgtcctatgaacaggcc
aagccggtggatattcctccgccgcctgcggacatgagcatggatgatgcactggagctg
tatcaggctgaatcccagccgcaatattcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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