KEGG   Arabidopsis lyrata (lyrate rockcress): 110231139
Entry
110231139         CDS       T01578                                 
Name
(RefSeq) DNA repair protein recA homolog 1, chloroplastic
  KO
K03553  recombination protein RecA
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    110231139
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aly03400]
    110231139
DNA repair and recombination proteins [BR:aly03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     110231139
    RecFOR pathway proteins
     110231139
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    110231139
SSDB
Motif
Pfam: RecA RecA_C ATPase Rad51 AAA_25 ATPase_2 AAA_24 AAA_16 ABC_tran PAXNEB
Other DBs
NCBI-GeneID: 110231139
NCBI-ProteinID: XP_020891757
Position
Unknown
AA seq 438 aa
MDSHLVLSLKLNPCFTPLSPLFSFTPCSYSPPLWLSSCYSRLLHSPVTVTAAKKLSHNIS
SEFDDRINGALSPDADSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGI
LTLDLALGGGLPKGRVVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSK
ALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMG
LQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEI
RSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAEIMEV
VVKKGSWYSYEDQRLGQGREKALQHFRENPALQDEIEKKVRLLMLDGEVHRSTPLMSSSS
SSASHREEEEEDSLDDFQ
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggattcacacctagtcttgtctctgaagctaaatccttgcttcactcctctttctcct
ctcttctctttcactccatgttcttattcgccgccgttatggctttcttcttgctactcc
cgcctcctccattctcctgtcaccgtcaccgccgcgaagaaactctcccacaacatcagt
tctgaattcgatgacagaatcaacggcgctctctctcccgacgctgattcccgcttcctc
gaccgccaaaaggctttagaggcagctatgaatgacattaacagttcatttggtaaagga
agtgttacaagattggggagtgctggtggagcactagtggagactttttcgagtggtatt
ttgactcttgatcttgctttaggtggaggcctgccaaagggtcgggtagtcgaaatatat
ggaccagaaagtagtgggaagaccacgctagcactccatgctattgctgaagtgcagaag
cttggaggcaatgcaatgcttgttgatgcagagcatgcctttgatccagcgtattctaaa
gcattaggtgttgatgtagaaaatttgatagtgtgccagccagataatggcgagatggct
ttagaaactgcagaccgtatgtgtcgctcaggtgcggttgaccttatatgtgttgattct
gtttcagcacttactccacgagctgagattgaaggtgagattggaatgcagcaaatgggt
ttgcaagctcgtcttatgagtcaagctcttcgtaaaatgtcaggaaacgcctctaaagct
ggttgtacacttattttcctgaaccaaataagatacaagattggtgtgtactatggaaat
ccagaggtgaccagcggaggaattgcgttgaagttcttcgcgtcagtccggctagaaatt
cgttctgctgggaagatcaaatctagcaaaggggatgaagatataggtcttcgagctcgt
gtaagagtgcagaagagcaaggtttcaagaccatataagcaagcagagttcgagattatg
ttcggggaaggagttagtaaactgggatgcattcttgattgtgctgaaattatggaggtt
gtggttaagaagggttcttggtacagctacgaagaccaaaggctcgggcaaggaagagag
aaagcactgcagcactttagggaaaaccctgctcttcaagacgaaattgagaagaaagtg
agattgttgatgttagatggagaagttcatcgatcaactcctttgatgagcagcagctct
tcctcagcttcgcatcgtgaagaagaagaagaggactcgcttgacgatttccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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