KEGG   Arabidopsis lyrata (lyrate rockcress): 9299777
Entry
9299777           CDS       T01578                                 
Name
(RefSeq) 26S protease regulatory subunit 10B homolog A
  KO
K03064  26S proteasome regulatory subunit T4
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03050  Proteasome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    9299777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:aly03051]
    9299777
Proteasome [BR:aly03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     9299777
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_5 RuvB_N AAA_2 AAA_22 nSTAND3 PRS7_OB DUF815 Prot_ATP_ID_OB_N AAA_14 AAA_7 TIP49 AAA_18 Parvo_NS1 RNA_helicase Mg_chelatase AAA_33 AAA_28 AAA_3 IstB_IS21 TsaE NACHT AAA_24 Sigma54_activat HBM bpMoxR Sec8_N ATPase ATPase_2 AAA_11 TPR_MLP1_2 AAA_25 ResIII PhoH AAA_30 ABC_tran NB-ARC AAA_19
Other DBs
NCBI-GeneID: 9299777
NCBI-ProteinID: XP_020869956
Position
Unknown
AA seq 399 aa
MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFA
IRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgaccgacgttgatgaatccgttagacgccgtaccgctgcggtctccgagtaccggaaa
aagctcctccaacataaggaactcgaatctcgtgttcgaacagctagggagaacttaaga
ggagctaaaaaggaattcaacaaaactgaggatgatcttaagtctcttcaaagtgttggg
cagattattggagaagtgcttcgacctctggataatgaaagattgattgtcaaagcaagc
agtggtcctcggtatgtggtgggttgccgaagcaaagttgataaggaaaagctaacctcg
ggaactcgagttgttctggatatgacaacactaacaataatgcgagcccttccccgagaa
gttgatcctgttgtttataacatgcttcatgaagacccaggcaacattagctattccgcg
gttggtggattaggtgatcagatcagagaactcagggaatctattgagctacctctcatg
aatcctgagcttttcctcagagtaggcatcaaacccccaaagggagttcttctgtatgga
cctccgggtaccggcaaaactctactagcgagggctattgccagcaacattgatgctaac
ttcttgaaggttgtatctagtgcaataatagacaaatacattggagaaagtgctaggctt
attcgggagatgtttaactatgcccgtgaacaccagccttgtatcattttcatggatgaa
atcgatgctattggtgggcgtcgttttagtgagggaactagtgctgatcgtgaaattcaa
agaacacttatggagttactcaatcagcttgatgggtttgacaacctcggaaaggtgaaa
atgataatggccacaaacaggccagatgtgcttgatcctgcgcttctccgtccgggaagg
ttagataggaagattgagatccctttgccaaatgagcaatcaagaatggatattctcaag
atccatgcagctggtatcgccaaacatggtgaaattgactacgaggctattgtcaaactt
gctgagggtttcaatggtgctgatctgcgtaacatatgcacggaagctggaatgtttgca
atccgagcagagcgggactatgtgatccatgaagatttcatgaaggcggtgagaaagctc
agtgaggcgaagaaactcgagtcgagttcgcactataatgctgattttggaaaagagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (41)   
   Pfam (41)   
All databases (50)   

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