KEGG   Arabidopsis lyrata (lyrate rockcress): 9300751
Entry
9300751           CDS       T01578                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-2
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aly03016]
    9300751
Enzymes [BR:aly01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     9300751
Transfer RNA biogenesis [BR:aly03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    9300751
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 9300751
NCBI-ProteinID: XP_002866377
UniProt: D7MTT0
Position
Unknown
AA seq 243 aa
MAPRWKWKGAEAKALAEPISKSVSELQLSLAETESSGTLSSSNVLLAVEPEQAELLDRCC
FGRLVLSAEKVKKWIQLSFEEAFYLLYNLKCIKISLQGRCLENEVDTWLYMKSKRPNFPM
FFKAYSHLRSKNWVLRSGLQYGVDFVAYRHHPSLVHSEYSVLVQSGDSDRLRVWSDIHCA
VRLSGSVAKTLLTLYVNGKFKGEDLNLPVCLENFTVEEQTISRWSPELSREDNPQIQNKM
LPM
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcgcctagatggaaatggaaaggtgctgaagcaaaagctcttgcagaacctatttct
aaatcagtctcagagctccagctctctctagccgaaacagagtcctcgggtaccttatcg
agttccaatgtgcttctagcggttgagccagaacaagctgagcttcttgaccgttgttgt
tttggcagactcgttttatccgctgagaaagtcaagaaatggattcagttatcttttgaa
gaagctttctatttgctctacaatctcaaatgcatcaaaatatctcttcaaggtcgttgc
ttggagaatgaagtagatacatggctctacatgaaatcgaaaagaccaaacttcccaatg
tttttcaaagcttattcacatttacgatcgaagaattgggtgttgagatccgggttgcaa
tacggtgtggatttcgtggcataccgtcaccatccatctcttgtccactctgaatactca
gttttggttcagtctggtgacagtgatcggttaagagtgtggtcagatatccattgtgct
gttcggttaagtggaagtgttgcgaaaacgttgttgactctctatgtcaatggtaagttc
aaaggagaggatttgaatctacctgtatgtttggagaacttcacagtggaagaacagacg
ataagtagatggagcccagaactcagtcgtgaagataatccacaaattcaaaacaaaatg
ttaccaatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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