KEGG   Arabidopsis lyrata (lyrate rockcress): 9303574
Entry
9303574           CDS       T01578                                 
Name
(RefSeq) exosome complex component RRP41-like
  KO
K12587  exosome complex component MTR3
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    9303574
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aly03019]
    9303574
Messenger RNA biogenesis [BR:aly03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     9303574
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 9303574
NCBI-ProteinID: XP_020875635
Position
Unknown
AA seq 256 aa
MAAKPGAATPTYSPKLVGRTRLPIFKDSDLDWSRPDGRGFHQCRPALLQTGAVSSASGSA
YAEFGNTKVIVSVFGPRESKKAMVFSDVGRLNCNVSYTTFASPTLGQGTDHKEYSSMLHK
ALEGVIIMETFPKTTVDVFALVLESGGSDLSVVISCASLALADAGIMMYDLITAVSVSCI
GKSLMIDPVTEEEGCEDGSFMMTCMPSRYEITQLTVTGEWTTPNINEAMQLCLDACSKLG
EIMRDLLKQAASASEE
NT seq 771 nt   +upstreamnt  +downstreamnt
atggcagcaaaacctggagctgcaactccaacgtattcaccaaaactcgtcggaagaact
cggcttcctattttcaaagattccgacctcgattggtctcgtcctgatggccgtggcttc
caccaatgccgacctgctttacttcaaactggtgctgtgagttctgcttctggttctgct
tatgctgagtttgggaacactaaagtcattgtttcagtatttgggccaagggagagtaag
aaagcaatggtttttagtgatgttggtagattgaattgcaatgttagctatacaactttt
gcttcccctactcttggtcagggaactgatcacaaagagtattcatcgatgcttcacaaa
gcattggaaggcgtaataattatggagacgtttccaaaaacaactgttgatgtttttgca
ttggtgcttgaatctggaggaagtgacctctctgttgtgatatcatgtgctagtcttgct
ttagctgatgccggaattatgatgtatgaccttatcacagctgtttcagtgtcttgcata
ggcaaaagccttatgattgacccagttacagaagaggaaggatgtgaagatggaagcttt
atgatgacatgcatgccatctcgttatgaaatcactcagctaaccgtcactggcgaatgg
acaacgcctaatatcaacgaggcaatgcagctttgcttggatgcttgttctaaacttgga
gagatcatgcgggatttactgaaacaggctgcctcagcttccgaagaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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