KEGG   Arabidopsis lyrata (lyrate rockcress): 9303907
Entry
9303907           CDS       T01578                                 
Name
(RefSeq) splicing factor 3B subunit 2
  KO
K12829  splicing factor 3B subunit 2
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    9303907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aly03041]
    9303907
Spliceosome [BR:aly03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    9303907
 Complex B
    9303907
 Complex C
   U2 SnRNP specific factors
    9303907
SSDB
Motif
Pfam: DUF382 PSP
Other DBs
NCBI-GeneID: 9303907
NCBI-ProteinID: XP_002867835
UniProt: D7MER2
Position
Unknown
AA seq 584 aa
MTADSTVAHVNSVVSNGDVSNGNTTASSKKSRESDRRRRRRKQKKNNKASQADVDTSDVS
GASDSKENADPQQQVSEQIVIEYVPEQAEFEDGFNDEFKEIFEKFNFREPVTSEEDGKKD
ESEDKEDVKKKVNSDSGSDEDERDNQNKEKGISNKKKKLQRRMKIAELKQVSARPDVVEV
WDATSADPKLLVFLKSYRNTVPVPRHWSQKRKYLQGKRGIEKQPFHLPDFIAATGIEKIR
QAYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLSALGDLYFEGKEF
EVKLRETKPGILSHDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPLGAS
FGYHIGGWGKPPVDEYGRPLYGDVFGVQQQDQPNYEEEPIDKSKHWGDLEEEEEEEEEEE
EEQEEEMDDEDLQDGTESVDTLSSTPTGIETPDAIELRKEQRKEPDRPLYQVLEEKGESV
APGTVLGTTHTYVIKTGTQDKTGAKRVDLLRGQKTDRVDVSLQPEELDAMENVLPAKYEE
AREEEKLRNKPVDLSDMVVEHVQQNSRKRKMHDKEGKKKKDFKF
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgaccgccgattcaaccgtcgcacacgttaatagcgtcgtttctaacggcgatgtctcc
aacggaaacaccaccgcttcctcgaagaaatctcgtgagagcgaccgtcgccgccgccga
cggaagcagaagaagaacaacaaagcatctcaggccgatgtagatacatcggacgtttct
ggtgcttctgattctaaggagaatgcagatccgcagcaacaggtttctgagcagattgtg
atagagtatgttccagagcaggctgaatttgaagatggttttaacgatgagtttaaggaa
atctttgagaagttcaactttcgcgaacctgttacctcggaggaagacggtaagaaggat
gagtctgaggacaaagaagatgtcaaaaagaaggttaactctgattcaggttcagacgag
gatgagcgggataaccagaacaaagagaaaggcatctctaataagaagaaaaagcttcaa
cggaggatgaagattgctgagctgaagcaggtttccgctaggcctgatgtcgttgaggtc
tgggacgctacttcagcagatccaaagttgttggtgtttttgaagtcgtatcggaataca
gttcctgttccacgacattggtcccagaagagaaaatatttgcagggaaaacgtggtata
gagaagcagccatttcatcttcctgatttcattgctgcaaccggaattgagaaaattaga
caggcttacattgagaaagaagatggtaagaagttgaagcaaaagcaacgggagagaatg
caaccaaagatgggaaagatggacattgactaccaggtccttcatgatgcatttttcaaa
taccaaacaaagcctaagctgtcagctctaggcgatttgtattttgaagggaaagaattt
gaggttaaactgagggaaacgaaaccagggattttatcacacgacttaaaagaagctctt
ggtatgcctgaaggcgctcctcccccatggctaattaacatgcagagatatggtcctcct
ccttcttacccacacctgaaaattcctggtttgaatgctcctattccacttggagctagc
tttgggtatcatattggcggctgggggaaacctccagttgacgaatatgggcgtccattg
tatggagatgtctttggtgtccagcaacaagatcagcctaactatgaggaggagcctatt
gataagagtaagcactggggtgatttagaggaagaggaagaggaagaggaggaggaagaa
gaggaacaagaagaggagatggatgatgaggatctacaagacggcactgaatctgttgat
acactgtcaagcacccctactggtattgagacaccagatgcaattgaacttcgtaaggaa
cagagaaaggaacctgataggcctctataccaggtactcgaagaaaagggagagagtgtt
gctcctggaacagtgctgggaaccacacacacatacgttattaagactggtactcaagac
aagacgggagccaaaagggttgatttactgagagggcaaaagacagacagagtggatgtc
agtttacagccagaagagctggatgctatggaaaatgtgttacctgccaagtatgaggag
gcaagagaagaggagaaattgcgcaataagccagtggacttgagtgacatggtcgtcgag
catgtgcagcagaatagcaggaagaggaaaatgcatgataaggaagggaagaagaagaaa
gatttcaaattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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