KEGG   Arabidopsis lyrata (lyrate rockcress): 9305350
Entry
9305350           CDS       T01578                                 
Name
(RefSeq) probable polygalacturonase At3g15720
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040  Pentose and glucuronate interconversions
aly01100  Metabolic pathways
Module
aly_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    9305350
Enzymes [BR:aly01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     9305350
SSDB
Motif
Pfam: Glyco_hydro_28 CBM_3 DUF5412 Sigma70_r4_2
Other DBs
NCBI-GeneID: 9305350
NCBI-ProteinID: XP_020872450
Position
Unknown
AA seq 412 aa
MKDFKTLFSVIIIISYYLEYGEGQKILSIKDFILKTNHTIIDYSQAFHEAWKGLCEDETP
NGSALVIRKNETYTLQPLIFRGPCVSSKIHIQIDGKLEGPRKPIYWKNTEKKSWLGFRDV
EGLVINGSGVLNPHGEAWWKSVSHSKRPTTISFESCTDIIYNGLTQINSPKNHISIYGCT
NATLSNLDISAPEDSPNTDGINICLSHKIQILDSSIQTGDDCVAITGGRGGSSDINITGV
ACGPGHGISIGSLGKDDETDDIVENVIVRSCSFTGTQNGARIKTWQGGQGLAKNILYENI
TLIDAGYPIIINQHYFDKSNYLKENAVKVNNITFRYFEGTSSSEIAIKLDCDETENCQNI
TMEHINITSPTPGKNLTAYCKFADVCSSFVNIDVDCNTNEDHHQPHILSPLP
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgaaggattttaaaacattgttctcagtgatcataattatatcctactatttggaatac
ggagaaggccagaaaattctaagcatcaaggattttatacttaaaactaatcacaccatc
attgattattctcaagcctttcacgaagcatggaaaggattatgcgaagatgaaacaccc
aacgggtcagctttagtgatacgaaagaacgaaacatacactttacaaccattaattttt
cgaggtccatgtgtatcttctaagattcatattcagattgatggaaaactcgaagggcca
aggaagccgatatattggaaaaacacagaaaaaaagagttggttaggtttcagggatgta
gaaggtctcgtcatcaacggctcaggagtgcttaatcctcatggggaagcttggtggaaa
tctgttagtcactctaaacgaccaacgacaattagttttgagtcctgcactgacattata
tataatggactaactcaaataaatagcccaaaaaatcacatttcaatttatggttgcacc
aatgcaactttatcaaatcttgatataagcgcacccgaagacagtccaaacactgatggt
atcaatatttgtctttcacacaaaatccaaatcttagactcctctattcaaactggtgat
gattgtgttgcaattactggtggaaggggtggttcttcagatatcaacattactggtgtg
gcatgtggtccgggccacggtatcagtattgggagtttggggaaagatgatgagacagat
gacatagtcgaaaacgtgatcgtaagaagctgtagttttactggaactcaaaatggagca
agaatcaagacttggcaaggaggacaagggttggccaaaaatattttgtatgaaaatatt
acattgatagatgctggataccccattatcatcaatcaacattattttgacaagagtaat
tacctaaaggaaaatgcagtgaaagtgaacaacataacatttaggtactttgaagggact
agctcaagtgaaattgcgataaagctagactgtgacgaaacagagaattgccaaaacatc
acgatggaacacatcaacatcacatctccaaccccgggtaaaaatctcaccgcatattgt
aaattcgccgatgtgtgtagttcatttgtcaacattgatgtcgattgtaatacaaatgag
gatcatcatcaacctcatatattgtctcctcttccataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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