KEGG   Arabidopsis lyrata (lyrate rockcress): 9310437
Entry
9310437           CDS       T01578                                 
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    9310437
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:aly01007]
    9310437
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aly03016]
    9310437
Enzymes [BR:aly01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     9310437
Amino acid related enzymes [BR:aly01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   9310437
Transfer RNA biogenesis [BR:aly03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    9310437
 Prokaryotic type
    9310437
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N Flu_PB2_6th DUF4472 Occludin_ELL
Other DBs
NCBI-GeneID: 9310437
NCBI-ProteinID: XP_002874370
UniProt: D7M642
Position
Unknown
AA seq 434 aa
MDINLFREEKGNNPEIIRESQRRRFSNVDVVDEIIQVDKEWRQRQFEVDSFRNEFNKLNK
HVAQLKIAKADATEIIQQTEKNKQDATAREVEVREAFATLQAKLLTFGNLVHDSVPFDKD
EANNLVIKLFGEKRFSTPDLKLKNHVDLVELLGIADTKRGADIAGGRGYFLKGFGVRLNQ
ALINFALDSLEDRGFTPLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKFLIATAEQ
PLCAYHRNQTIHPSELPKRYAGYSTCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITAPND
SWAMLEEMLKNSEEFYQALKIPYRVVSVVSGALNDAAAKKYDLEGWFPASETYRELVSCS
NCTDYQSRRLDIRYGQNKSKDQTKQYVHMLNSTLTATERTICCILENYQREDGVDIPDVL
QPYMGGKKFMPFKR
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggatatcaatctatttcgtgaagaaaaaggtaacaatccagagatcattagagaatcg
caacgccggagattttccaatgttgatgttgttgacgagattattcaagttgacaaagaa
tggcgtcagcgtcaatttgaagttgatagcttcagaaacgagttcaacaagctgaataaa
cacgtggctcagctaaaaattgctaaagctgatgcgactgagattattcagcaaacagag
aaaaacaaacaggacgctaccgcgagagaggttgaagttcgtgaagcttttgctactttg
caagccaaattgttgacatttggaaatctggttcatgactcggttccatttgataaggac
gaggcaaataatcttgtgattaaactgttcggtgaaaagcggttttctacacctgatctg
aagctgaaaaaccatgtggatctcgttgagcttctcggtattgcagataccaaaagaggt
gctgatattgctggagggagaggttatttcttaaaaggatttggtgtgaggcttaaccaa
gctcttatcaactttgcgctagactctttggaagatagaggatttacgcctttacaacct
ccgtttttcatgaggaaggatgttatggccaaatgcgcacaattggctcagtttgatgaa
gagctttacaaggtgactggtgaaggagatgacaagtttcttattgcaactgctgagcaa
cctctttgtgcataccatcgtaatcaaacgatccatccgtccgagcttcccaaaagatat
gctggttactcgacctgttttagaaaagaagctggttctcatggaagagatacacttggc
attttccgtgttcaccagtttgagaaagttgaacagttttgcatcacggctcctaatgat
tcgtgggcaatgctcgaagagatgttaaagaactcggaagaattttaccaagcgcttaaa
attccataccgagtcgtttcggttgtctctggagctttgaacgatgcagcggctaaaaag
tatgacctggaaggatggtttcctgcttcagagacttacagagagcttgtgtcctgttcc
aactgtacagactatcagtctcgaaggcttgatattagatatggtcagaataagagcaaa
gatcagacgaagcagtatgttcatatgttgaattcgactcttaccgcaacagagaggaca
atttgctgcattcttgagaactaccagcgagaggatggtgttgatattcctgacgttctg
cagccttatatgggcggcaagaagtttatgcctttcaaaagatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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