KEGG   Arabidopsis lyrata (lyrate rockcress): 9312192
Entry
9312192           CDS       T01578                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03020  RNA polymerase
aly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    9312192
  09124 Replication and repair
   03420 Nucleotide excision repair
    9312192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aly03021]
    9312192
   03400 DNA repair and recombination proteins [BR:aly03400]
    9312192
Transcription machinery [BR:aly03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     9312192
DNA repair and recombination proteins [BR:aly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      9312192
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L Tup_N
Other DBs
NCBI-GeneID: 9312192
NCBI-ProteinID: XP_002877842
UniProt: D7LU23
Position
Unknown
AA seq 116 aa
MNAPDRYERFVVPEGTKKVSYDRDTKIINAASFTIEREDHTIGNIVRMQLHRDENVLFAG
YQLPHPLKYKIIVRIHTTSQSSPMQAYNQAINDLDKELDYLKNQFEAEVAKFSNQF
NT seq 351 nt   +upstreamnt  +downstreamnt
atgaatgctccagaccgatacgagcgattcgtcgtccctgaaggaaccaagaaggtttct
tatgatagggatacgaagatcatcaatgccgcttccttcacgattgagagagaagaccat
acgattggaaacattgttcgcatgcaacttcaccgtgacgagaatgtcttgtttgctgga
tatcaacttcctcatcctctcaagtacaaaatcatagtgaggattcacacaacaagccag
tcttccccaatgcaagcatacaaccaggccatcaatgatctggacaaggagctcgattat
ttgaagaaccagtttgaggctgaggtggccaagttttccaatcagttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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