KEGG   Arabidopsis lyrata (lyrate rockcress): 9314367
Entry
9314367           CDS       T01578                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040  Pentose and glucuronate interconversions
aly01100  Metabolic pathways
Module
aly_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:aly00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    9314367
Enzymes [BR:aly01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     9314367
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix NosD
Other DBs
NCBI-GeneID: 9314367
NCBI-ProteinID: XP_020879728
Position
Unknown
AA seq 388 aa
MPSSLLTVLLFLLSIPSSSAQTYNILSYGAKPDGKTDSTKALTAVWAKACASVKPVTILV
PKGRFFLRSIIFDGAKCKRKSVTFRIQGTLVAPSDYRIIGKENYWILFQHLDGLSVYGGV
LDAQGTSLWSCKKSGKNCPSGATSIGFQSSSNVVISGLTSLNSQMFHVAINGCRNVKLEG
VKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGIS
IGSLGKESVEAGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPI
VIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKL
TYRNKPATTDCSHAGGSEAGFQRPNSCL
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgccttcttcacttctcacagttcttctctttctcctctcgatcccatcgtcctcagct
caaacctacaatatcctctcttacggagccaaacccgacggtaaaaccgactccaccaag
gccttaaccgccgtgtgggccaaagcctgcgcctcggtcaaaccggtaaccattttggta
cctaagggacgatttttcttaagaagcattatttttgacggtgccaaatgtaaacgcaag
tccgtcacgttccgtatccaaggtacacttgtggctccatcggattatcgaatcatcggt
aaggaaaattattggattttattccagcatctcgacggcctctctgtgtacggtggagtt
cttgacgctcagggaacttctctttggtcttgcaaaaagtccggcaagaattgcccgagt
ggcgccacgagcatagggtttcagagctcaagcaacgtggtgatctccgggctgacgtca
ttaaacagtcagatgtttcacgtcgcgattaacggctgccgtaacgtgaagctcgaagga
gtcaaagtttcggctgacggaaacagtccaaacactgacggaatccacgtgcagtcatca
tccaccgtgtccatcctcaactccaaaatctccaccggcgatgattgtgtctccatcggt
cccggcactaacggcctctggatcgagaacgtcgcttgtggtcctggccatggtatcagc
attgggagcttgggaaaagaaagtgtggaggcaggtgtacaaaacataacagtaaaaacg
gcgacgtttacaggaacagagaatggggtgagaataaagtcatgggccaggcccagtaat
ggatttgctaagaatatccgtttccaacattgtgttatgaacaacgtacaaaacccaatc
gttattgaccaaaactattgtcctggcaacgaaaattgccctaatcaggtttctgggata
aaaattagcgatgtaatgttcttcgatatacacggaacatcggcgacagaagtcggagtg
aaattagactgtagctctaagaagccgtgcaccggaattcgaattcaagatgtgaagttg
acgtaccggaataaaccagcaacaacagattgtagtcatgccggaggaagtgaggcagga
tttcaacggcccaacagttgtctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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