KEGG   Arabidopsis lyrata (lyrate rockcress): 9321520
Entry
9321520           CDS       T01578                                 
Name
(RefSeq) CSC1-like protein At3g21620
  KO
K21989  calcium permeable stress-gated cation channel
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:aly02000]
    9321520
Transporters [BR:aly02000]
 Other transporters
  Pores ion channels [TC:1]
   9321520
SSDB
Motif
Pfam: RSN1_7TM PHM7_cyt RSN1_TM
Other DBs
NCBI-GeneID: 9321520
NCBI-ProteinID: XP_002885454
UniProt: D7L0U9
Position
Unknown
AA seq 756 aa
MATLNDIGVAAAINILTAFAFFIAFAILRLQPVNDRVYFPKWYLKGLRSSPIKTGGFASK
FVNLDFRSYIRFLNWMPQALRMPEPELIDHAGLDSVVYLRIYLLGLKIFFPIACIAFTVM
VPVNWTNSTLDQLKNLTFSDIDKLSISNIPTGSSRFWVHLCMAYVITFWTCFVLQREYKN
IGSMRLQFLASEQRRPDQFTVLVRNIPPDPDESVSELVEHFFKVNHPDYYLTYQAVYNAN
KLSELVQKRKKLQNWLDYYQNKHSRNPTKRPLIKIGFLGCWGEEVDAIDHYIEKIEGLTR
KISEEKETVMSSTKSLVPAAFVSFKRRWGAVVCSQTQQSRNPTEWLTEWAPEPRDIYWDN
LALPYVQLTIRRLVIAVAFFFLTFFFMIPIAFVQTLANIEGIEKAVPFLKPLIEVKTVKS
FIQGFLPGIALKIFLIVLPSILMLMSKFEGFISKSSLERRCASRYYMFQFINVFLCSIIA
GTALQQLNSFLNQSATEIPKTIGVSIPMKATFFITYIMVDGWAGVAGEILRLKPLIIYHL
KNFFLVKTEKDREEAMDPGTIGFNTGEPQIQLYFILGLVYAAVSPILLPFILVFFALAYV
VYRHQVINVYNQEYESAAAFWPDVHRRVVIALIVSQLLLMGLLSTKRAARSTPLLFILPV
LTIGFHKFCQGRYQPIFVRYPLQDAMVKDTLERMREPNLNLKTFLQNAYAHPVFKAADNL
ANEMVVEEPHPDRTPDLVATKRGSRRLHSGSAETFT
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggctacactaaacgatatcggagtcgcagcagcgatcaatatcttaaccgcattcgcg
ttcttcatcgcctttgcgattcttagacttcaaccagttaacgacagagtctatttccct
aaatggtatctcaagggtttaagaagtagccctattaaaactggtggctttgctagcaag
tttgtcaatttggattttcgatcttacatcagattcttgaattggatgcctcaagctttg
agaatgcctgagcctgaacttattgatcatgctggtttggattctgttgtctatctcagg
atttacttacttgggttgaagatcttttttcctatagcatgtattgcttttactgtaatg
gtaccggttaattggaccaactcgacgttggatcagttaaagaatctaactttcagcgat
atcgataaactctctatatcgaatataccaactggatcatccaggttttgggtgcatttg
tgtatggcttatgttattaccttctggacatgctttgttttacaacgagagtacaagaat
attggttccatgaggctacagtttcttgcttctgagcaaaggagacctgaccagtttaca
gttcttgtgaggaacattcctccagatcctgatgaatccgttagtgaacttgttgagcat
ttctttaaggtcaaccatccagactactacctcacttaccaggcggtctacaacgcaaac
aaactgtctgaattggttcagaagaggaaaaaattgcagaattggcttgattactatcaa
aacaaacactctaggaatccgactaaaaggcctttaataaagataggttttctcggctgt
tggggtgaagaagttgatgcaatcgatcactacatagaaaaaatcgagggtctaacgaga
aaaataagtgaagagaaggagactgtgatgagcagcacaaaatcgcttgtgcctgcagct
tttgtatccttcaaaaggcgttggggcgcagttgtttgctctcaaactcaacagtcaaga
aacccgacagagtggctaaccgagtgggctccagagccccgagacatatactgggacaat
ctagcattaccatatgttcaactcacaatccgaagactagtaatagctgtggctttcttc
ttcctcactttcttcttcatgatccctatagctttcgtgcagacactcgccaacattgaa
ggcatcgaaaaggctgttccattcttgaaaccgcttatcgaagtgaaaacggtaaagtca
ttcatccaaggtttccttccgggtatcgcattgaagatattcctcattgtcctcccaagc
atacttatgctaatgtcgaaattcgaaggcttcataagtaaatcttcactagaaagaagg
tgtgcaagcagatactacatgttccagttcatcaacgttttcctctgtagcataatcgcg
gggactgcgcttcaacagcttaacagcttcctaaaccaatctgcaaccgaaatcccaaag
acaattggtgtgtcgataccaatgaaggccactttctttataacctacataatggtggac
ggatgggctggtgttgctggagagatactgaggttgaaaccattgataatctatcatctc
aagaacttcttccttgtgaaaacagagaaagatagagaagaggcaatggatcctggaacc
ataggattcaatactggtgaaccacagatacaactctacttcattctcggtctagtttac
gccgctgttagccccattctccttccatttatcctcgtcttcttcgccttagcttatgtg
gtttaccgtcatcaggttataaatgtgtataaccaagagtatgagagtgctgccgcgttc
tggcctgatgttcatagacgtgtagtgattgcactaatcgtatctcagcttcttttgatg
ggattgctaagcacgaaacgagctgctcgttcgactccattgctattcatactgcctgtg
ttaaccattggattccacaaattctgtcaaggacgttaccaacctatctttgtcagatac
cctttacaggatgcaatggttaaagatacgttggaacgcatgagagaaccgaatttaaac
ttgaaaacgtttcttcaaaacgcgtatgcacatccggtgtttaaggctgctgataatctg
gcgaatgagatggttgtagaagagccacatccggatcggacgccggatttagtggcgact
aaacgtggctcgagaaggctgcatagcggctctgctgaaacctttacatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system