KEGG   Arabidopsis lyrata (lyrate rockcress): 9326219
Entry
9326219           CDS       T01578                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
  KO
K14778  ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aly03009]
    9326219
Enzymes [BR:aly01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     9326219
Ribosome biogenesis [BR:aly03009]
 Eukaryotic type
  90S particles
   Helicases
    9326219
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-GeneID: 9326219
NCBI-ProteinID: XP_002892900
UniProt: D7KDP5
Position
Unknown
AA seq 487 aa
MEEPRSEDEGGITIMAKSRKNPKTVVQIQSQKLDSDQNAPQFEKFTNPNPSPVANFEGLG
LAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAEDP
YGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTRSLVSRPHIVITTP
GRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATM
TSNLQTLLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDKGIRS
AMIFVSTCRTCQRLSLMLDELEVENVAMHSLNSQSMRLSALSKFKSGKIPILLATDVASR
GLDIPTVDLVINYDIPRNPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKK
MEPYNNKIITDSLEVTKVSKAKRVAMMRMLDNGFEDKVKDRRKLKRKTLADKGLLKKRSK
RQKSTEN
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggaggaaccgagatcggaggatgaagggggaatcacaatcatggcgaaatcccgcaaa
aatcctaaaaccgtagtacaaattcagtctcagaaacttgattccgaccagaatgctcct
caatttgagaaattcacaaatcccaaccctagtcccgtcgctaatttcgaagggctcgga
ttagctgagtgggcagtggaaacgtgtaaagagcttgggatgcgtaaacccactccagtt
caaactcactgcgtgcccaagatattggccgggcgagacgttttagggcttgctcagact
ggtagtggtaaaacggcggcgtttgctctaccgatacttcaccgcctcgctgaagatcct
tatggagtcttcgcgcttgtagtgacgccgactagagagctagcgttccagctcgctgag
cagtttaaggctttgggttcgtgtttgaatttgcgttgctctgtcattgtgggaggaatg
gatatgttgacgcaaacgaggagcttggtttcacgacctcatatcgttattactactcct
gggagaattaaggttttgcttgaaaacaatcctgatgttcctccagttttctctagaacc
aagttcttagtactggacgaggcggatagagttcttgatgttggtttccaagacgagttg
cggacaatctttcagtgtctgccaaagagtagacaaacattgttgttctctgctacgatg
actagtaacttacagacattgctcgaacattcttcaaacaaagcttatttctatgaagcc
tatgaagggttaaagactgttgacactcttacgcagcagttcattttcgaagacaaagat
gcgaaagaactatatcttgtgcacatactgtcgcaaatggaagataagggcattcgatca
gccatgatttttgtctccacttgcagaacatgtcaaaggttaagtcttatgcttgacgag
cttgaagtggaaaatgtagctatgcattctctgaattctcagtctatgcgactatctgca
ctaagtaaattcaagtctgggaaaataccgatattgcttgcgactgatgttgccagccgt
ggattggacattcctactgtcgaccttgtcatcaattatgacattccgagaaatccgagg
gattatgttcatcgtgttggacgtacagctagagctggtagaggaggactggctgtaagc
attatcactgagaccgatgtgaaacttatccataaaatagaagaggaagttggaaaaaag
atggaaccgtacaacaacaaaataatcactgacagtttagaagtcacaaaggtctcaaaa
gccaaaagggtggcaatgatgaggatgctagataatggattcgaagacaaggttaaagac
cgaaggaaattgaaacgtaaaacacttgcggataaagggttgcttaagaaacggagcaaa
aggcagaaatcaacagaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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