KEGG   Arabidopsis lyrata (lyrate rockcress): 9327624
Entry
9327624           CDS       T01578                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
aly  Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:aly00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:aly01002]
    9327624
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:aly03110]
    9327624
Peptidases and inhibitors [BR:aly01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   9327624
Chaperones and folding catalysts [BR:aly03110]
 Other chaperones and cochaperones
  AAA proteases
   9327624
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 AAA_16 TIP49 AAA_22 nSTAND3 AAA_2 AAA_28 RuvB_N AAA_14 IstB_IS21 AAA_33 Mg_chelatase LonB_AAA-LID AAA_17 bpMoxR AAA_7
Other DBs
NCBI-GeneID: 9327624
NCBI-ProteinID: XP_002894238
UniProt: D7KFW9
Position
Unknown
AA seq 720 aa
MAATASNSLLRSSHFLGSHIIISSPTPKTTRKPSFPFSFASRAKYQITRSSLDNNSPNGK
PNSPFSSQVALAAILFSSISSSPPRALAVVDEPASPSVVVEAQAQAVKPSTSSPLFIQNE
ILKAPSPKSSDLPEGSQWRYSEFLNAVKKGKVERVRFSKDGSVLQLTAVDNRRASVIVPN
DPDLIDILAMNGVDISVSEGESSGNDLFTVIGNLIFPLLAFGGLFLLFRRAQGGPGGGPG
GLGGPMDFGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPK
GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC
IVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSA
LLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMN
EAAILAARRELKEISKDEISDALERIIAGPEKKNAVVSDEKKRLVAYHEAGHALVGALMP
EYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDE
NVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYSMATAD
IVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYIS
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggcggccacagcttctaactcattacttcgctcttcacatttcttaggatcccatatc
ataatctcatctcccacccctaaaaccaccagaaaaccctcgttccctttctccttcgcc
tcccgtgcaaaataccaaatcactcgatcgtctctagacaacaattctccaaatggcaaa
cccaattcgccattctcgtcgcaagttgctttagcagctattctgttctcttcaatttca
tcatctccgccgcgagctttagccgtagtggacgaaccagcttctccgtctgtcgttgtg
gaagctcaagctcaagcagtgaagccatcgacgtcatcgccgttgttcattcagaacgag
atacttaaagcacctagtcctaaatcatcggatcttcctgaaggatcacagtggcgatac
agcgagtttcttaacgctgtgaagaaaggtaaagtggagagagttagattcagcaaagat
ggttctgttcttcagcttactgctgtcgacaatcgccgtgcctccgtcatcgtccctaac
gaccctgaccttattgatatcttggctatgaacggagttgatatatcggtttctgaagga
gaatcctctggcaatgacttgttcactgtcattggaaacttgattttcccgcttttggcc
tttggtggactcttcttgcttttcaggcgagctcagggtggtcctggtggtggtcctgga
ggcttgggtggtcctatggatttcggacgttcgaaatccaagttccaggaagtgcctgag
actggtgtgtcattcgcagatgttgctggtgctgatcaagctaagttggagttacaggaa
gttgtggatttcttgaagaatcctgataagtacacagccttgggtgctaagattcctaaa
gggtgtttgcttgttggaccgcctggtacgggtaagacactcctggctagggcggtggct
ggggaggcaggagtaccgttcttctcttgcgcggcctcggagtttgtggagctttttgtg
ggtgttggtgcatctagagttagggatttgttcgagaaggctaagtcgaaagcaccttgt
attgtattcattgatgagattgacgctgtggggaggcagagaggagctgggatgggagga
ggaaatgatgagagagaacagactattaatcagttgttgacggagatggatggattttct
ggcaactctggtgtgatagttttggcagctacgaataggccggatgttcttgattcggca
ctgttgaggcctggaaggtttgatcgacaggtcacggtggataggcctgatgtggctggc
agagtcaagattcttcaggttcattctagggggaaggcacttggtaaagatgtggacttt
gacaaggttgcgaggaggacccccggtttcacaggtgctgacctacaaaacctgatgaat
gaagcggcgattcttgcggccaggcgtgagcttaaggagataagcaaggatgaaatctct
gatgctcttgagaggatcattgctggacctgagaagaagaatgcagttgtctctgatgag
aagaagagacttgttgcataccatgaggctggtcatgctctagtgggtgctcttatgccg
gaatatgatccggttgccaagatttccatcattcctcgtggccaagctggtgggctcact
ttttttgctccaagcgaagaaagacttgagtctggattgtacagcaggagctacctcgag
aatcaaatggctgttgcacttggcggaagggttgcagaggaggtgatctttggggatgag
aatgtgacgaccggagcatcaaatgatttcatgcaggtgtctcgtgtggcacgtcaaatg
attgagagatttgggttcagcaaaaagattggacaagttgctgttggtggccctggtgga
aatccctttatgggtcaacaaatgtcatcacagaaagattactcaatggcaactgcagat
attgtagatgctgaggtgcgagagttagttgagaaggcatacaagagagcaacggagatc
ataacaactcatattgatatcctacacaagcttgcacagctcctcatcgagaaagaaact
gttgacggcgaagagttcatgagcctctttattgacggccaagctgagttgtatatatct
tga

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Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (30)   

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