KEGG   Alteromonas sp. Mac2: AV940_01085
Entry
AV940_01085       CDS       T05899                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
alz  Alteromonas sp. Mac2
Pathway
alz00300  Lysine biosynthesis
alz00470  D-Amino acid metabolism
alz01100  Metabolic pathways
alz01110  Biosynthesis of secondary metabolites
alz01120  Microbial metabolism in diverse environments
alz01230  Biosynthesis of amino acids
Module
alz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:alz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AV940_01085
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AV940_01085
Enzymes [BR:alz01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AV940_01085
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: AMJ89181
Position
complement(263034..264284)
AA seq 416 aa
MDFFAYKNGQLFAEDVAVADIAAQYQTPVYVYSRATLERHWHAFNDAIGEHPHLICYAVK
ANSNLGVLSTLAKIGSGFDIVSGGELARVIEAGGDASKVVFSGVGKKADEIRYALEQGIM
CFNVESEPELHRINAVAESLGKKAPISLRINPDVDAKTHPYISTGLKANKFGIARERALQ
TYELAASLPYLNVVGMDCHIGSQLTEIGPFVDALERLLLLIDELAERGITIDHLDVGGGL
GVTYNDEEPPHPKAYAAAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEGEEKS
FAIVDAAMNDLLRPALYSAWQNIIPVKQESTATARNYDVVGPVCETGDFIGKDRELAIEP
TDLLAVRSAGAYGFAMASNYNSRCRPAEIMVDGDATIVVREREILKDLWKGEHKLT
NT seq 1251 nt   +upstreamnt  +downstreamnt
gtggattttttcgcttataaaaacggccagcttttcgctgaagatgttgccgttgcagat
attgctgcacagtaccaaacccctgtttatgtctactcacgggcaacgttagaacgtcat
tggcatgcctttaatgatgcaattggtgagcaccctcaccttatttgttatgcagtaaaa
gccaattcaaacctaggtgtactcagtacattagccaaaattggctctggttttgacatt
gtttctggtggtgaacttgcccgagttattgaagccggtggtgatgccagcaaagtggtc
ttttcgggtgtaggtaaaaaagcagacgaaattcgttacgcgttagaacaaggcattatg
tgctttaacgtagaatctgagcctgaattgcatcgtattaacgcggtagccgaatcgctc
ggcaaaaaagcgcccatttcacttcgcataaacccagatgtagatgcaaaaacgcatccc
tacatttcaacaggattgaaagcaaataagtttggtattgcccgtgaacgtgcactgcaa
acctatgaacttgccgcatcacttccttacttgaacgtagtgggtatggactgccacatt
ggttcgcaattgactgaaattgggccttttgttgatgcactagagcgtctattgctgctt
attgatgaattagcagagcgcggtattaccattgatcatttagatgttggtggtggttta
ggcgtgacttataacgatgaagaaccaccgcatccgaaagcttacgctgcggccatggca
gaaaaaatggtgggtcgtgagaaccttaagctcattttagagcccggtcgagccattgcc
gcaaacgcaggtattttggttactgaggttgagtttattaaagaaggtgaagagaaaagc
ttcgctattgttgatgccgctatgaatgacctgcttcgacctgcactttactctgcatgg
caaaatatcattccagtaaaacaagaaagtactgccacagcacgcaattatgatgttgta
ggcccggtatgtgaaaccggtgatttcatcggtaaagaccgtgaacttgctattgaacca
accgacctgttggcagtgcgaagtgccggtgcgtatggctttgccatggcatcgaactac
aatagccgctgccgtccagcagagattatggtagatggtgatgccacaattgtggtgcgt
gaaagagaaattctaaaagatctctggaaaggtgagcacaaacttacgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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