KEGG   Alteromonas sp. Mac2: AV940_13135
Entry
AV940_13135       CDS       T05899                                 
Name
(GenBank) DNA-binding protein
  KO
K01338  ATP-dependent Lon protease [EC:3.4.21.53]
Organism
alz  Alteromonas sp. Mac2
Brite
KEGG Orthology (KO) [BR:alz00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:alz01002]
    AV940_13135
Enzymes [BR:alz01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.53  endopeptidase La
     AV940_13135
Peptidases and inhibitors [BR:alz01002]
 Serine peptidases
  Family S16: lon protease family
   AV940_13135
SSDB
Motif
Pfam: Lon_C LON_substr_bdg AAA AAA_5 ChlI AAA_PrkA AAA_16 T3SSipB RuvB_N AAA_2 AAA_22 nSTAND3 AAA_3 AAA_18 IstB_IS21 AAA_14 Viral_helicase1 RsgA_GTPase AAA_28 DUF5446 VEFS-Box ECH_2 AAA_17
Other DBs
NCBI-ProteinID: AMJ91335
Position
complement(3101523..3103877)
AA seq 784 aa
MTVERENRIEIPVLALRDVVVYPHMVIPLFVGREKSIRCLEAAMENEKQIFLVAQKDAGV
DEPDADDIYTVGTIATILQLLKLPDGTVKVLVEGSVRGEVEGYEQSEPFFVANVNKIEDG
AIDESEQEVLIRSAVSQFEGYVKLNKKIPPEVLTSLNGIEDAARLADTMAAHMPLKLTEK
QKVLEMKGVNERLEYLMALMEGEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKE
LGELDDAPDEFEALAKKIEDAKMPQEALDKAKSELQKLKMMSPMSAEATVLRSYIEWLTN
VPWNKRSPVKKDLSRAEVVLNEDHYGLEKVKERILEYLAVQQRVKKLKGPILCLVGPPGV
GKTSLGQSVAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSLPGKLVQKMAKVGVKNPLF
LLDEIDKMSSDMRGDPASALLEVLDPEQNNSFSDHYLEVDYDLSDVMFVATSNSMNIPGP
LLDRMEVIRLSGYTEDEKLNIATRHLISKQMERNGLKSKELEITESAIIGMIRYYTREAG
VRSLEREISKVCRKAVKDILLNKSKDKVSVTQDNLKDYLGVQRFDYGKADKDNQIGQVTG
LAWTQVGGDLLTIETTSVPGKGKMTSTGSLGDVMQESIKAAMTVVRSRAEKLRINEDFYE
KRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVKCDVAMTGEITLRGEVLAIGGLK
EKLLAAHRGGIKTVVIPAENERDLEEIPENVKKDLSIHPVKWIDDVLDIALQEPVESFEV
ATKS
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgacagttgagcgagaaaatcgcattgaaattcctgtgcttgccttaagggacgtggtt
gtttatccgcatatggtcatacccttattcgtcgggcgagaaaaatcgatccgttgtctt
gaagcggcaatggaaaacgagaaacagattttcttagtggcccagaaagacgccggtgtg
gacgaacccgatgccgatgacatttataccgttggtacaattgctactattcttcaactt
ttgaaactacctgacggcacggtaaaagtgttagtagaagggagtgtgcgtggtgaagtt
gaaggttatgagcaatcagagcctttctttgttgctaacgtaaataaaattgaagacggt
gctatcgatgagagcgagcaagaagtgcttattcgctctgcggtatcgcagtttgaaggt
tatgttaagctaaacaaaaaaataccgcctgaggtacttacgtcgcttaatggtattgaa
gatgctgcacgcttagcagataccatggctgcgcacatgccgcttaaactcaccgaaaaa
cagaaagtgctagaaatgaaaggggtgaacgaacgccttgagtatttaatggccttgatg
gaaggtgaaatcgatttgctacaggttgagaagaaaattcgaacccgtgttaaaaagcag
atggaaaaaagtcagcgtgagtactatttgaatgagcaaatgaaagccattcaaaaagag
ctcggcgagcttgatgatgcaccagacgaatttgaagcgttagcgaagaaaatcgaagac
gctaaaatgccgcaagaagcgttagataaagcaaagtctgagctccaaaagcttaagatg
atgtcgcctatgtcggcagaagctactgtgttgcgcagctatattgagtggctaaccaat
gtaccgtggaacaaacgctccccagtgaagaaagatttatctcgcgctgaagtggtttta
aatgaagaccattacggcttagagaaagtcaaagaacgcattttagaatatcttgcggta
caacagcgtgttaagaagcttaaaggacccattttgtgtcttgtagggcctcctggtgta
ggtaaaacctctctaggccaatctgttgcgaaagcgacagggcgcaagtatgtacgtatg
gcattgggcggcgtgcgtgatgaagctgaaattcgtgggcacagacgtacctacattggc
tcattgcccggcaagctagtgcaaaagatggcaaaggtaggggtgaaaaacccacttttc
ctattagatgaaattgataagatgtcgtctgatatgcgtggtgatccagcgtctgcgtta
ctagaagtgcttgacccagaacagaataatagtttcagtgaccactatttagaagtggat
tacgacttatctgatgtgatgtttgtggctacctcgaatagcatgaatattccaggcccg
ttacttgatcgtatggaagttattcgtctttctggttataccgaagacgaaaaactcaat
attgcaacgcgtcacctaatcagcaagcaaatggaacgtaacgggcttaagtctaaagag
cttgagattaccgagtcggccattattggtatgattcggtattatacccgtgaagcaggt
gtacgtagtttagagcgtgaaatttctaaggtatgtcgtaaagctgtaaaagatatcttg
ctgaataagagcaaagataaagtgtcagtgacccaagataaccttaaagattacttaggt
gtacaacgtttcgattacggtaaagctgataaagacaatcaaattggccaagttactgga
ttagcatggacacaggttggtggtgatttacttactatcgaaactacgtctgtgccgggt
aaaggcaagatgacatcaactggttcgcttggtgatgttatgcaggaatctattaaagct
gcaatgacggttgtgcgcagtcgcgctgaaaagcttcgtattaacgaagatttttatgaa
aaacgcgatattcacgtgcacgtgcctgaaggtgctacaccgaaagatggccccagtgct
ggtatcgctatgtgtactgctttagtgtcatcattaacgggtaaccctgttaaatgtgat
gtggccatgacgggtgaaatcacactgcgtggtgaagtgttagccattggtgggttgaaa
gaaaagctactagctgcgcaccgtggtggaattaaaacggtggttattccagcagaaaat
gaacgtgatttggaagaaattccagaaaatgtaaaaaaagatttatcaattcaccctgta
aagtggattgatgatgtgcttgatattgcacttcaagagccagtagagtcttttgaggtt
gcgacgaaaagctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (23)   
   Pfam (23)   
All databases (30)   

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