KEGG   Alteromonas mediterranea DE1: amad1_16910
Entry
amad1_16910       CDS       T02340                                 
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
amaa  Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:amaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amaa03400]
    amad1_16910
Enzymes [BR:amaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     amad1_16910
DNA repair and recombination proteins [BR:amaa03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    amad1_16910
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 DNA_pol_B_2 DNA_pol_B_exo2
Other DBs
NCBI-ProteinID: AFV86861
Position
3812979..3815351
AA seq 790 aa
MQASSIQQGFILNKGTFTLRGKVYVELWVKTPTGTVRLISAPQAPTCFVALEHVEALQSI
AQRVPATLDIKNDGFNTLEQKQVATVKTATESHMHQLRQLAREANIVLYEADIRVADRYL
MERFVYGAVEFIGPNAGADSSPTTVIENAQIRPCHFRTRFSSLSIDIECDEHEMLFSIAL
AGEGVNLVLLVCPPTFEKRGVEQRNDKPYQLLVLNSEKELLHAFFHHVTSYDPDIILGWN
VKQFDMAVLARRAKANKLKFTLGRHEREASVRQWEDQTLVDVPGRCVIDGIEALKTMTYQ
FESFSLDNVSEALLGENKLIQETDKLAAIKRLYHEDPIALADYNYKDTELVNRIQEQTQF
IDFLALRSILTGLDMTRPGGSVAAFLNVYLPKLHRKSYIAGVRPENGGLASPGGYVMRSQ
PGLYKDVLVLDFKSLYPSIIRTFKIDPMGLAEGLKSPKHAIEGFKGAVFSRTSHFLPTII
ENLWLQRDEAKKQKDAPRSQAIKILMNSFYGVLGSGGCPFYDPRLASSITLRGHEIMQTT
AGWIEELGYTVIYGDTDSTFVHVEGNGTLGTPTETGIKLAQIINEKWSALLKDRYDIACH
LEIEFESHFSTFFMPTIRGSTEGSKKRYAGMKDGQLTFKGLENVRSDWTTLAKTFQYELY
ERVFTGQPVESYISDMLNAVKAGELDDDLVYKKRLRKPLSSYIKSLPPHVKAARRADEHF
KEQGLPLRYQTNTTIAYVITVQGPQTVETAFAPLDYDHYIEKQIKPIAESILPLISLNFE
QIANDQLTLF
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgcaagcttcatcaattcagcaaggatttatactcaataaaggtaccttcacactacgt
ggcaaagtctacgtagaactgtgggttaaaacgccgacaggtaccgttaggttaatatct
gcgccccaagcccccacgtgttttgtggcattggagcatgttgaagcgttacagagcatc
gcacaacgggttccggccacattagacattaagaatgacggctttaatacgctagaacaa
aagcaagtggccacggttaaaaccgcgactgagtctcacatgcaccagctacgtcagctt
gcacgagaggcaaatattgtactgtacgaagccgacatccgtgtggctgatcgctattta
atggaaaggtttgtgtatggcgcggttgaatttatcgggcctaacgccggcgctgatagc
tcaccgacaacagtaattgaaaatgcacaaatacgcccctgtcactttcgaacacgcttc
tcttctctaagcatagatattgagtgtgacgaacatgaaatgctgtttagtattgcttta
gccggtgaaggggtaaaccttgtgctccttgtttgcccaccaacttttgaaaagcggggt
gtggagcagcgaaacgacaagccataccaactactagtgcttaattcggaaaaagagcta
ctacacgcgttttttcaccatgttacctcctacgaccccgacattattttaggatggaat
gttaagcagttcgacatggcagtacttgctcgaagggccaaagcgaataaactcaaattt
acccttggccgccatgaacgcgaagcttcagtcagacaatgggaagatcaaaccttggtt
gatgtaccagggcgctgtgtaatagatggcattgaagcacttaaaacaatgacctatcag
tttgagtcgttctcgttagataacgtttcagaggcactgttaggtgaaaacaaacttatt
caagagaccgacaaattagcggcgataaaacgtttatatcatgaagaccccattgcgctg
gccgactataactataaagacacggagctggtaaaccgcatacaggagcaaacccaattt
atcgacttcctcgcgttgcgaagcatactgacggggttggatatgacgaggcccggcggg
tcggtggcggcatttttgaacgtatacttacctaaacttcatcgcaaatcttatattgct
ggcgttagacctgaaaatggcgggttagcgagcccaggtggctatgtcatgcggtcacag
cctggcctctacaaagatgtattagttctcgactttaaaagtctatacccttctattata
cgtacattcaaaattgaccccatggggttggctgaaggattgaaatcgcctaaacatgct
atagaagggttcaaaggcgcggtattcagtcgtacctcccactttttgcctactatcatt
gagaacttatggttgcagcgtgacgaggcgaaaaagcaaaaggatgcacctcgttcacaa
gcgattaaaatattaatgaattcgttttacggtgtactaggtagtggtggctgccccttt
tacgatccccgccttgcgagttctatcactttacgtggacatgagatcatgcaaaccact
gccggatggatagaagaactcggttataccgtcatttacggtgataccgactcgaccttt
gttcacgtagaaggtaacggcacattgggtacgcccacagaaacgggtattaagcttgca
caaatcatcaacgaaaaatggtcggcactacttaaagaccgctatgacattgcttgtcac
ttagagattgaattcgagtctcacttttcaacgttttttatgcctacgattaggggctct
accgaaggaagtaaaaaacgttacgcgggaatgaaagacggacaactaacctttaaaggc
ttagaaaacgtgcgctcagactggacaactctggctaaaacgtttcaatacgaactgtac
gaacgggtattcactggtcaacctgtagagagctatataagtgacatgctaaacgcggtt
aaagcaggggaacttgatgatgatttagtgtacaaaaagcgcttaagaaaaccgttgtct
tcttatattaaatcacttcccccccatgtaaaagctgcgcggcgagctgatgagcatttt
aaagagcaagggttgccattgcgctatcaaacaaacacaacaattgcctatgtgattaca
gttcaaggcccgcagactgtggaaaccgcgttcgccccccttgactatgatcattatatc
gaaaagcaaataaagcctattgcggaaagcatactacctcttatctcgttaaactttgaa
cagattgctaatgatcaacttaccttattctag

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