KEGG   Alteromonas macleodii ATCC 27126: MASE_03215
Entry
MASE_03215        CDS       T02246                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amac  Alteromonas macleodii ATCC 27126
Pathway
amac03410  Base excision repair
amac03430  Mismatch repair
amac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MASE_03215
   03430 Mismatch repair
    MASE_03215
   03440 Homologous recombination
    MASE_03215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amac03400]
    MASE_03215
DNA repair and recombination proteins [BR:amac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     MASE_03215
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     MASE_03215
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MASE_03215
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH Peripla_BP_6 PIGA
Other DBs
NCBI-ProteinID: AFS36197
Position
738095..739816
AA seq 573 aa
MILPIVRREVTGASLSSDLHPVIDRIYRGRNIANLDDLENGLKGLTHFNVLKGMPQAAQI
LADAVVQNKRIIIVGDFDADGATSTSVCILALRAMGYHNVDFLVPNRFDFGYGLSVPIVD
EAAKQGAEVIVTVDNGISCIDGVTHAKSLGMQVVVTDHHLPGDVLPPADAIVNPNQPGCE
FPSKNLAGVGVAFYIMLALKAELQQQGHFERAGVAPPNLASLLDIVAVGTVADVVVLDKN
NRILVHQGLQRIRAGKCRPGIKALVEVANRDCAHLTSTDLGFVVGPRLNAAGRLDDMSQG
IACLLEDETIQARMIAAELDALNKERREIETGMKAQAETVLEQMALDEGDMPSALVVYRE
DFHQGVIGIVAGRLKEKYLKPVIAFAHQDDEIIKGSARSIPGVHIRDVLDEVNTRYPGVI
EKFGGHAMAAGLSLPVAKLQDFEQAFVDIARAHMAKLDGNHALLSDGDLSSKELCLPFAH
LLRQAGPFGQGFESPLFDGEFALLDQRLVGQKHLKMVLKSDGANEVDAIAFNVDLKSWPN
AMVKRVHIAYRLDINVFRGQETVQLIVEQIEAR
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgattttgcctattgttcgccgtgaggttaccggcgcctcgcttagttccgacttacat
cctgttatcgatagaatttatcgcggtcgtaatattgcgaatttagatgacttggagaat
ggtctaaaagggctaacacacttcaatgtcttgaaggggatgccgcaggccgcgcaaatt
ctcgctgatgctgttgtgcaaaataaacgtattattattgtgggcgattttgatgccgac
ggagcaaccagtacatcggtatgtatattggcgcttcgagccatgggctatcacaacgtt
gattttcttgtacctaaccgctttgactttggttacggacttagcgtgcctattgtggat
gaagctgccaaacagggggcagaggttattgtcacagtggacaatggcatttcctgtatt
gacggtgtgacccatgcaaagtcgttgggaatgcaggttgttgttaccgatcaccatttg
ccaggcgatgttctacctcctgctgatgcgatagtaaatcctaaccaacctggctgtgaa
ttcccttctaaaaatttggctggggttggcgttgccttttacatcatgctagcacttaaa
gccgagttacagcagcaagggcattttgaaagagcgggagtagcgccaccaaacctagcg
tcgctacttgatattgttgcggttggcaccgtggccgatgtagtagtgcttgataaaaac
aaccgaattttagttcatcaaggccttcagcgcattcgggcgggtaagtgtcgacctggc
attaaagcattggtcgaagtagcgaatcgcgattgcgctcacttaacctcaactgactta
ggctttgtggttgggccaaggcttaatgccgcgggtcgattagacgacatgtcgcaaggc
attgcgtgcttgttggaagatgaaaccattcaagcgcgaatgatcgctgcggaactcgat
gcgcttaataaagaacgccgtgaaattgagaccggcatgaaagcgcaagcagaaaccgtg
ctagagcaaatggcgctggatgaaggcgatatgccaagcgcactggtggtttatcgcgaa
gactttcaccaaggggttattggtattgtggcagggcgtttgaaagaaaagtaccttaag
cccgttattgcttttgcccatcaagacgacgagatcattaaaggttcggcacgctcaatt
cccggcgtgcacattcgcgatgtacttgatgaagttaatacgcgctaccctggcgttatc
gaaaaatttggcgggcatgccatggccgctggattaagcttgcccgtagctaagcttcaa
gacttcgagcaggcttttgttgatattgcgcgagcgcacatggcaaagcttgatggaaat
catgctttactttccgacggtgacttgtcatcgaaagagctgtgtttaccctttgcgcat
ttactgcgtcaagcaggtccgtttggacagggctttgaatcaccgctattcgatggtgaa
tttgcactacttgaccagcgcttagttggccaaaagcacttaaaaatggtgttaaaaagt
gacggtgctaacgaggtcgatgctattgcgtttaacgttgatttaaaatcatggccgaat
gccatggtcaaacgcgtgcatattgcctatcggctcgatatcaacgtatttcgcggtcag
gaaaccgtgcaacttattgtagagcaaatagaagcgcgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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