KEGG T02246: MASE

Alteromonas macleodii ATCC 27126: MASE_09680

Entry

MASE_09680        CDS       T02246

Name

(GenBank) deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

amac Alteromonas macleodii ATCC 27126

Brite

KEGG Orthology (KO) [BR:amac00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amac03400]
    MASE_09680
Enzymes [BR:amac01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     MASE_09680
DNA repair and recombination proteins [BR:amac03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    MASE_09680
Prokaryotic type
    MASE_09680

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

AFS37467

Position

complement(2289278..2290909)

AA seq 543 aa
MVPVHSKQSVTVIWFKRDLRLRDHEPLYRAVEKNENILPLFCWEPSLIADPHMDMRHWQF
IQQSIDDINAQLPSGARLLTLHCEVIDALELIAQHYAISTVRSYQEIGLSVTHNRDISVS
NYLKKKKINHIESQYGAVMRGLPHREQWQQNWDRHFTTKTYDIDINSVNWVDWTQHNNIN
TACKNLDELGLFDCHITSQTGTHFSEKSNYYRQDVLDKLKKLNKMQPGGERRAWQVLKDF
FDARGQYYHQHISKPEYARRACSRLSPYLAWGNLSIKQVYQSVQHQKQTKKLLPNSDRKQ
WSRALAALTSRLHWHCHFIQKFESEHSIEWRPMNSGYENFPFIDGPEAERRFYLWTMGLT
GYPLVDACMRALKYTGYLNFRMRAMVTSFLCHHLNVHWLKAAHYLATQFLDFEPGIHYPQ
IQMQASVTGIHTVRLYNPATQSSKLDPEGVFIKKWVPELAKLPSEAVHAPHLLPPLEAQM
LDFDVERDYVEPLVDITENNRITAKRLWDYRERDDVVKEAHRIVKRHTMQNSPSRAWLKT
KIK

NT seq 1632 nt +upstreamnt +downstreamnt
atggttccagtacattctaaacaatctgtgactgtcatatggtttaaacgtgaccttcgt
cttcgagaccacgagcctctctaccgtgcagttgaaaaaaacgaaaacattcttccgctt
ttttgttgggaaccttcccttatagccgacccgcatatggacatgcgtcattggcaattt
atccagcaaagtatcgacgacattaacgcccagttgccttcaggcgcccgtttactgacc
ttacactgtgaagttattgatgcgctcgaacttattgcccagcactacgccatttcaacg
gttaggagttaccaagaaatagggttgagcgttacgcataaccgtgacatttcagtaagt
aactatttgaagaaaaagaaaataaaccatattgagtcccagtatggcgcagtgatgcgt
ggtttgcctcaccgtgagcaatggcagcaaaactgggatcgtcactttacaacgaaaacc
tatgatattgatataaacagcgttaattgggtcgactggacccagcacaacaacatcaat
actgcttgcaaaaatttagatgagcttggtctgtttgattgtcatattactagtcaaacc
ggtactcattttagcgagaaatcgaattattatcggcaggatgttttagacaagttaaaa
aaattaaacaagatgcagccaggcggtgaaaggcgtgcttggcaagtattaaaagatttt
ttcgatgctagaggacaatactaccatcaacatatttctaagccggaatatgcaagacgg
gcatgttctcgtttaagtccctacttggcatggggcaatctatcaattaagcaagtttac
caaagcgttcaacatcaaaagcagacgaaaaagttactgccgaattctgatagaaaacaa
tggagtcgcgccctagccgctttaacgtctcggttacattggcactgccattttattcaa
aaatttgagagcgaacacagtattgaatggcgaccaatgaatagtggatacgaaaacttt
ccgtttatagatggcccagaagccgagcgtcgcttttacctttggacaatgggattgacc
ggctatccgttggtagatgcctgcatgcgagcacttaagtataccgggtacttaaacttt
cgaatgcgcgccatggtaaccagttttctgtgtcatcacctaaatgtacactggctaaag
gcagcgcattatttggcaacacagttcttagattttgagccaggtattcattacccccaa
atacagatgcaggctagcgtaaccggcattcacaccgtgcggttatacaaccctgcaaca
caatcttcaaaattagatcctgaaggtgtatttatcaaaaagtgggtgccagaacttgct
aaattacccagtgaagctgttcacgcccctcacttattgccgcccctagaagcgcaaatg
ttagattttgacgttgaacgcgactatgtggaaccgctcgttgatataacagagaataat
cgcatcacggcaaagcgcttgtgggactatcgcgagcgagatgatgtggttaaagaggcg
catcgtattgttaaacgccacaccatgcaaaatagtccaagtcgtgcatggctgaaaaca
aaaattaaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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