KEGG   Alteromonas macleodii ATCC 27126: MASE_18730
Entry
MASE_18730        CDS       T02246                                 
Name
(GenBank) pectin methylesterase pme8A
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
amac  Alteromonas macleodii ATCC 27126
Pathway
amac00040  Pentose and glucuronate interconversions
amac01100  Metabolic pathways
amac02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:amac00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    MASE_18730
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MASE_18730
Enzymes [BR:amac01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     MASE_18730
SSDB
Motif
Pfam: Pectate_lyase_4 Pectinesterase Laminin_G_3 Beta_helix 3keto-disac_hyd Laminin_G_2 Big_2
Other DBs
NCBI-ProteinID: AFS39232
Position
4391962..4398099
AA seq 2045 aa
MKLTKIAALMGGVILVAACGEKSSTNVTLPPDPALTGVFVDSPVEGINYSSASVENGTTN
AQGEYSYFRGEQLAFSIGQLTFPETPASSVISPLDLFATDNPFNQSVVNTLRLLQSLDTD
GDPSNGISLSASAGDVAVATLDEGQTIEDFFNQSDADFAADVEVWLGSAGGASATLVDKA
QAISHFVNYLEAELGTLFPNTFDVTRFTGDIYAPTLEGRSVSQATYTFTPDDEANLSGTF
VRVHGEESTTGSYEFSFGRKVIALSYSEQTEYLISRAFNTVNEVYSLCVISPDNAQSMPL
VLHVESCLANEDPQNYLFAFTQEQAYVELAKLEEAANSIQAALEENFDTDTDTFFSSSYK
RLSEEPDAGALYYVTGGSPLVDATTGQLTLEGDRFSIGNAAANPGANTSASDTVGMGIYN
LSEGFTISFDVISHNGGGTFSLYVDNNTTGQDNSVHGAASKFVSIGLADGTMVPGTRFTY
TYEPGDDIGGGDPSAPDAKILDSSVTNSFFQLRTDSSATITIDNLKIETIADAVDPVPPV
EPEPTEPEEPEVIPSVPLPLSYTFAGESEDIFSTNFAAIENAAGEQVAMFTITGGSVTQI
DTGIQLDGGRFTLGNTEPDTQSSSDDTSSTGALDLSRPYNVIFDVISAEDSEGDNKFQIY
VDNNTSGSANSHLGSDSRFFNEPVLDLVPGTTMTVEGQIATPNSYLQFRTESGSIVVIDN
IRIEYIDENTLLEETFETDADTFFSPEYKSTDGGATPFYSVTGGGSGLVISEGQLAIDSA
RFTMGNSTPDTDTTADDTVTTGILDLSREYTISMDIIAVEDSEGDNNFQIYVDNNTSSSS
KSIHGGDSKFYSELVNNLVPGQRLTIDGFIGTPTSFLQLRTESGGKVVIDNFVISYVGEA
PDDSKFSCENEPQLYFCDDFASGSLDNFTLISDDAGSNGPQGTFDVVEDDGNKVMRYTAG
GEGGEIFLVKESALSNLPENGNYFVEARIRPRQNSTTRNKQIFLLGRYDSAGNWYGGGLN
VQNSSSSTQVEVAVSTEGSISRPVQAKSPIVLGEKDGTDGSWYRVRFEMENEKLTVYLDG
ENMGTAEDTTYSAAGLIGLFTNNRSFELDDLKVGDPAVKPVQLTLDFKETEWETTTSSDP
LFVYVTAVQNDGITEDTFTVTSSDASVVSVEQQGPQVTITPRAAGSAMVTFTSGSDPTLS
KHIAVNVGEGFTMPTATYGDLFPDTTPYSGNNNAYPDTLLSLTFDSEPTLGSSGEVRIYN
ATDDTLVDVINIAADEDFIGFEGQDRQRKVAYRPASVVGNKLVIKPHTNALQYGQSYYVA
ISDGAVTGATLNGESFSGIGKSANWRFATRAAAPSGANVTVDDDGEADFRTVQGALNYVM
QNVSSDTPSRITIRDGEYQEMLFLRGNNNVTLQGESRDNTVVYYDNFESFNSGSGKSEAP
AAGTPSGGRSVFLVEGVDNLTLTNFTLKNSHIRSNDYSNQAETIYFNSDSGRLTAVDMNF
VSEQDTLLLKGFSWFYNSLIAGNVDFIWGYVNTALFENSEIRTIGDSKNGNPDEDTAGGY
ILQARVPDISYKGFIFLNSSFTNGPGPIGNGVLDDSTYIARSGGSASYFDNITLINNRFD
THIATIGWAGEGVRDQPAPNPSPATAAAGWREYGSMDMQGNPLDLSSRQFAHILADSEVT
ELTSRTAIFSHFNNGEGWVPSEPNLPNVAPAPTLDAYGFAQYNYALTGGAGGTVVTVDNG
ADLQAALDSAANSNTPVTVYVDGTITDANNGGTGSPIEIKDMNDVSIIGVADRGEFDGIG
ILIRRANNVIIQNLKIHHVLTDGKDAISIEGDNDGSTTSNIWIDHNELYSTLSVDKDFYD
GLVDSKRGAKNITISYNYLHDHWKASLHGHTENDVDSDNTERLITFHHNRFENIESRLPL
FRYGHGHLYNNYYNQISSTAINSRIGAELQVENNVFEYTQNPIVSFYSDVIGYWNTSGNL
FGEGVTWTTPADGDVVAGPDATPTSSYEVPYDYVLDDADVVKQRVINYSGVGKINQNADD
IPPLN
NT seq 6138 nt   +upstreamnt  +downstreamnt
atgaaactcacgaaaattgctgcccttatgggcggcgttattctcgttgccgcctgtggc
gagaaaagctctaccaatgtaaccctcccccccgacccagcactgactggcgtatttgtt
gatagccccgttgaaggaatcaattattcctctgcttctgtggaaaacggcactaccaat
gcgcagggtgagtactcttacttcagaggcgagcagctcgctttcagcattggccagctg
acgtttccagaaacaccggcatcaagcgttatttctcctcttgacctgttcgcaactgac
aacccttttaaccagtcggtcgtaaacacgcttcgacttttacaatccctcgataccgat
ggcgacccaagtaacggtatatcgctaagcgccagtgctggcgatgtggcggtagctacg
ctagacgaagggcaaaccattgaagacttctttaatcaatctgatgcagattttgcagcc
gatgtagaggtgtggctgggttccgctggcggagccagtgctacgcttgtggataaagca
caggctatcagccatttcgtaaattaccttgaagccgaattaggtacgctgttccctaac
acctttgatgtaacccgcttcacaggcgacatttacgcaccaacactggaaggcagaagt
gtatctcaagccacttacacctttacgccagacgacgaagcgaacttgtcaggtactttt
gtaagagtgcacggtgaggaaagcacaacaggtagctatgaattctcttttggacgaaaa
gtcatagcccttagttacagtgagcaaactgagtatcttatttcccgtgctttcaacacg
gttaatgaggtatacagcctgtgcgtgatatctccagataacgctcagtctatgccgtta
gtgctgcatgttgaaagctgtcttgccaacgaagacccgcaaaactacctgtttgctttt
acccaggaacaagcatatgttgaactggcaaagctagaggaagcagcgaattctatccag
gcggcgcttgaagaaaacttcgataccgacaccgatacgtttttctcatcgtcgtacaag
cgcttaagtgaagagccagatgctggcgcgctttattatgtaacaggtggcagcccacta
gtcgacgccaccacaggtcaacttacccttgaaggcgatcgattcagtataggtaatgct
gcagccaacccaggtgccaatacgtcagcatcagacacggtaggcatgggtatttataac
cttagcgaaggttttaccattagcttcgacgttatttctcacaatggcggcggtacgttc
agcctttatgtagataacaacaccacaggtcaagataactctgtacacggtgctgcttct
aagttcgtgagcataggtttagcagacggtacgatggtacccggcacacgctttacctat
acctatgaaccgggtgacgatattggtggcggcgatcctagcgcacctgacgcgaaaatt
ctcgatagctcggtaactaatagtttcttccaattgcgcacagattcgagtgccactatc
actatcgataacttaaaaattgaaacgatagctgacgcagttgacccagtgcctccggtt
gagcctgagcctaccgaacctgaagagcccgaagttattccaagtgtaccgctgccgctt
tcctatacctttgcaggcgaaagcgaggatattttctcgacaaactttgccgcgattgaa
aatgcagcgggtgagcaagtcgccatgtttaccattaccggtggctcggtaacgcaaatt
gacactggtattcagcttgacggcggacgctttacccttggtaatactgaacctgatacc
caaagctcgtctgacgatacatcatcaaccggtgcactggatttgagccgtccttacaat
gttatctttgatgtcatttctgctgaagattccgaaggcgacaacaaattccagatttac
gtggataacaatacttctggcagcgccaactcacacctaggttcagattctcgtttcttt
aatgagcctgtgctcgatttagtaccgggaaccaccatgacagtagaaggacagatagca
acgcctaactcgtaccttcaatttagaacggaaagtggctctattgtggtcatcgacaat
attcgcattgaatatattgatgaaaacaccctgttagaggagacgtttgaaacagacgct
gacaccttcttcagccctgaatacaagtcgaccgatggtggtgcgacaccgttttatagc
gtaacgggcggcggctcaggtttagtgatttccgaaggccaactagccatcgacagtgca
cgctttaccatgggcaacagtacccctgatacagacacaaccgctgatgacactgtaacc
acaggtatattagatttaagccgtgaatataccattagtatggatatcattgccgttgaa
gacagtgaaggcgacaacaacttccagatatatgtagataacaacaccagcagtagcagc
aaatcgatacatggtggcgactctaaattctacagcgagctggttaataaccttgtgcca
ggacaacgcctaactatcgatggatttattggtacacccacctcgttcctgcagcttcgt
actgaaagtggcggcaaagtggttatcgataactttgttatatcgtatgtgggtgaagcg
ccagatgacagcaagtttagctgtgaaaatgaaccacagctttacttctgtgacgacttt
gcatcgggctctttagataacttcacgcttatttcagacgacgcaggctcaaacggccca
caaggcacgtttgatgttgtagaagatgacggcaacaaagtgatgcgctacaccgctggc
ggtgaaggtggcgaaattttcttggttaaagagtcggcgctaagcaaccttccagaaaat
ggaaattactttgttgaagcgcgcattcgtccaagacaaaacagcaccacgcgaaacaaa
cagatcttccttctaggtcgttatgatagcgctggaaactggtacggcggaggtttgaat
gtacaaaactcatcgagcagtacacaagtggaagtagcggtaagtaccgaaggcagtatt
tctcgacctgtccaagctaagtcacctattgtactgggtgaaaaagacggtacagacggc
tcgtggtatcgcgtacgttttgaaatggaaaacgagaaactcaccgtttatttagacggc
gagaacatgggtacagcagaagatacgacctatagcgcagcgggactgattggcctcttc
actaataaccgttcgttcgagctggacgatttaaaagtaggtgaccccgctgttaaacca
gttcaacttactctggatttcaaagaaacagagtgggagaccaccaccagtagcgatccg
ttattcgtttacgttaccgcagtacaaaacgacggtataactgaagacacgtttaccgta
accagcagtgatgcgagtgtggtcagcgtagagcagcaaggtccacaagttaccattacc
cctcgcgctgccggtagcgcaatggtaacttttacttctggctctgaccctacgttaagc
aaacacattgccgttaatgttggcgaaggcttcacaatgcctaccgccacctatggcgac
ttattcccggataccacaccttattcgggcaataacaatgcgtatcccgataccctactc
tcgttaaccttcgacagcgaacccaccttaggaagtagcggtgaagtgcgcatttacaat
gcgacagacgacaccctggtagacgttatcaatattgcagctgatgaagactttattggc
tttgaaggccaagacagacagcgcaaagtggcttaccgcccagcatcagttgtaggcaac
aaattagtgattaagcctcatacaaatgcccttcaatatggtcagtcgtattacgtagcc
attagcgatggtgcggtaaccggcgcaacgctaaatggtgaaagctttagtggtattggc
aagagtgcgaactggcgctttgcaacaagagccgctgcaccttctggcgcgaatgttacc
gtagatgatgacggcgaagcggatttccgcacggtgcaaggtgcgcttaattacgtgatg
caaaacgtaagtagcgatacgccatctcgcattacgattcgtgacggcgagtatcaggaa
atgctgttccttcgcggtaacaacaatgtcacgcttcaaggcgagagccgagacaatacc
gtggtgtactacgataactttgagagctttaacagcggtagcggcaagagcgaagcacct
gcggcgggcacgccatctggcggaagaagcgtgtttttagtggaaggcgtagataacctg
acgctaacgaacttcactttgaaaaactcacacatcagaagcaacgactactctaaccaa
gctgagacgatttactttaacagtgattcaggtcgtctaactgccgttgatatgaacttt
gtgagtgaacaagatacgctgctgttaaaaggctttagttggttctacaactcattgatt
gccggcaacgttgatttcatttggggttacgtaaataccgcactgtttgaaaacagcgaa
attcgcaccattggcgactctaaaaatggtaaccctgacgaagacacagcgggcggctac
attctacaagctcgcgtacctgatatttcttataaagggtttatcttcttaaacagcagc
ttcaccaatggcccaggccctattggtaacggtgtactcgacgactctacgtatattgca
agaagtggcggcagcgcgagctacttcgacaatattacgcttattaataaccgtttcgac
acccacattgccactatcggctgggcgggcgaaggagtacgcgaccaacctgcaccaaac
cctagccctgcaaccgcagcagctggatggcgtgaatacggcagcatggatatgcagggt
aacccgcttgatctttcaagccgtcagtttgcccacattcttgccgacagcgaagtgact
gaacttaccagcagaacggcaatattctctcactttaataacggcgaaggctgggtgcca
agcgagcctaacttaccgaatgtagcacctgctccaacgcttgatgcgtacggttttgca
caatacaactatgcattaaccggcggtgctggcggtacggtagtcaccgtagataacggt
gctgatctgcaggcggcgttagatagcgcagcgaacagcaacaccccagtaacggtttat
gtagatggcaccattaccgacgcaaacaatggcggtacgggctcaccgattgaaataaaa
gacatgaacgatgtgtcaattatcggggttgcagacaggggcgaattcgacggtattggc
atcttaattcgacgcgcaaataacgtgattattcaaaacctgaaaatccaccacgtgctt
actgatggaaaagacgctatctctattgaaggtgataacgacggctctaccaccagcaac
atttggattgaccacaatgagctttacagcacattgtctgtggacaaggatttctacgac
gggttagtagatagtaaacgcggcgcgaaaaacatcactatctcttacaactaccttcat
gatcattggaaagcctcgttacacggccacactgagaatgatgtagacagtgataatacc
gagcgtttaattaccttccaccacaaccgctttgagaatatcgagtcacgtttaccgtta
ttccgctacggtcacggtcacttgtataacaactattacaatcagatatcctctacggca
atcaattcaagaattggtgcagagctacaggtagaaaacaatgtgtttgagtacacgcaa
aacccaattgtttctttctactcagacgttattggatattggaacacgtcaggcaacctg
tttggcgaaggcgtaacctggacaacgccagctgatggtgacgttgtagcaggacctgat
gcaacgcctacatccagctacgaagtgccgtacgactacgtactagatgatgccgacgtg
gttaagcagcgagttatcaactactcgggcgtaggtaagatcaaccagaatgccgatgac
attcctccgttaaactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (71)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (89)   

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