KEGG   Alteromonas mediterranea U7: I876_18780
Entry
I876_18780        CDS       T02721                                 
Name
(GenBank) transcriptional activator Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
amae  Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:amae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amae03000]
    I876_18780
   03036 Chromosome and associated proteins [BR:amae03036]
    I876_18780
   03400 DNA repair and recombination proteins [BR:amae03400]
    I876_18780
Transcription factors [BR:amae03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    I876_18780
Chromosome and associated proteins [BR:amae03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    I876_18780
DNA repair and recombination proteins [BR:amae03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      I876_18780
SSDB
Motif
Pfam: HTH_8 DUF5805 DCAF17 Phage_NinH EnY2 HTH_28 DUF2106
Other DBs
NCBI-ProteinID: AGP91586
Position
4267494..4267787
AA seq 97 aa
MFDQNVTSPFTTTVTTPSQTQAQKPLRDSVKQAVNKYLKQLDNANIDNLYEMVLAEVEAP
LLEEVMTYTRGNQTRAAIMMGINRGTLRKKLKQYGMN
NT seq 294 nt   +upstreamnt  +downstreamnt
atgttcgatcaaaacgtgacttcaccttttactacgacagtaactacgccttcacaaacg
caagcgcaaaagccattgcgtgactctgtaaagcaagcggttaacaagtacctaaagcaa
ttagataacgcaaacatcgacaacctgtacgaaatggtactggctgaagtagaagcgccg
cttctagaagaagtcatgacttacactcgcggcaaccaaacacgcgccgctatcatgatg
ggcatcaaccgtggcacacttcgcaagaagcttaagcaatacggcatgaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system