KEGG   Alteromonas mediterranea MED64: I533_18235
Entry
I533_18235        CDS       T02958                                 
Name
(GenBank) ada regulatory protein
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
amag  Alteromonas mediterranea MED64
Pathway
amag03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    I533_18235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amag03000]
    I533_18235
   03400 DNA repair and recombination proteins [BR:amag03400]
    I533_18235
Enzymes [BR:amag01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     I533_18235
Transcription factors [BR:amag03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    I533_18235
DNA repair and recombination proteins [BR:amag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     I533_18235
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC SAYSvFN DUF6233 HhH-GPD DUF3196
Other DBs
NCBI-ProteinID: AGP83596
Position
complement(4160054..4161481)
AA seq 475 aa
MSDSKASQNEALTESVFSKARLSRDPRFDGRFFVGVKTTGIFCRPICPARLPKEDNVIYY
QLAAQAMADGYRPCFRCRPDSAPSSAAWKGVGATVERALSLLSSLPTERVGDIATRLGIS
ERYLNKLVVNAVGMGPKKFQNMQRTLFAKQLIQQTHLSMTDIATTAGYQSLRQLQRAVEQ
FCATTPSKLRKKEPATQKVITLFLSYRPPYNWSYVREFLAARAISGMEVVSDNSYGRYFS
CGESIGYFNAVHNEARHGFELHIDMPDLRNLHKTIENIKLLLDLHADPLLIEESLKQAGL
PDNALTAGLRLPSAWSVFESGCRAIVGQQVSVKAAIGQVTLLVHQLGKKGAVSDKYNTNS
TAYYCFPTPEAVAGSNLAFLRMPQARKEAVRQFACLFLNDKVPNHKEILAIKGVGPWTLD
YLKMRGERNPDVYLEGDLIVRKMAQLYPVEPAQAAPWRSYLTLQLWQLSNQQKEV
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtctgacagcaaggcttcccaaaacgaggcattaaccgaatcggtcttttcaaaggca
aggcttagccgagatccccgattcgacgggcgtttctttgtgggcgtaaaaacgaccgga
atattttgcaggcctatttgcccggcaaggctccctaaagaagacaacgtcatttattac
cagcttgcagcgcaagcgatggcggatggctatcgtccttgttttcggtgtaggcctgac
agcgcgccaagctctgccgcgtggaaaggcgtaggggcaaccgtagagcgggcgttgtcg
cttctttcttcccttcctacagagcgcgtgggtgatattgcgacgcgccttggcataagc
gagcggtatctcaataagctggtggtgaatgcggtaggtatggggcctaaaaagtttcaa
aatatgcagcgtacgctatttgctaaacagcttattcaacaaacccatttgtctatgaca
gatatcgctacaacagcaggttatcagtcacttcgacaattgcagcgtgcggtagagcag
ttctgtgctaccacgccctctaagctaaggaaaaaagagcccgctacccaaaaggtgatt
acattgtttctttcttatcggccgccttacaactggtcttacgtcagagagtttttagcc
gcacgcgctatttcaggtatggaagtcgttagtgataacagctacgggcgctatttttct
tgtggtgaaagtattggctatttcaacgcggtgcataatgaagctcgccatggctttgag
ttgcatattgatatgccagatttacgcaacctgcataaaacgattgaaaatatcaagtta
ttactcgaccttcacgctgacccactgcttattgaagaaagtttaaagcaagcaggctta
cctgataatgcgttaactgcggggttacggctaccgagcgcttggagtgtatttgaaagt
ggatgtcgcgctattgtaggccaacaagttagcgttaaagcggccatcggacaggttacg
ctactggtgcatcagttagggaaaaaaggcgctgtatccgacaagtacaataccaactca
acagcatactattgcttcccaacacccgaagcggttgcggggagtaacttggcgtttctg
cgtatgccgcaagcaagaaaagaggctgtgcggcagtttgcctgtttatttttgaatgat
aaggtaccaaaccacaaggaaatactggcaataaagggggtggggccctggacgttagat
tatttgaaaatgagaggtgagcgaaaccctgacgtttaccttgaaggcgatttaattgtg
cgaaaaatggcgcagctatatcctgtagaacctgcacaggccgcaccatggcgtagctat
ttaacccttcagttgtggcaacttagcaatcaacaaaaagaggtctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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