KEGG   Alteromonas mediterranea UM7: I635_00015
Entry
I635_00015        CDS       T02724                                 
Name
(GenBank) recombinational DNA repair ATPase
  KO
K03629  DNA replication and repair protein RecF
Organism
amai  Alteromonas mediterranea UM7
Pathway
amai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    I635_00015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amai03400]
    I635_00015
DNA repair and recombination proteins [BR:amai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     I635_00015
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 AAA_21 AAA_27 AAA_29 AAA_16 ABC_tran DUF2813 nSTAND1 cobW NTPase_1 RsgA_GTPase Adeno_IVa2 Dynamin_N FtsK_SpoIIIE AAA_28 Zeta_toxin AAA_33
Other DBs
NCBI-ProteinID: AGP95550
UniProt: S5BT33
Position
2879..4003
AA seq 374 aa
MPIASFYIQRDIMKLDKVQITQFRNLTSVSFSPSPSLTVIVGANGSGKSSLIEALYYLGF
GRSFRTNKHSAVIQNEKDNFSVFASCKDELGEALKLGFQRNRNDSFTCSINGEHSNKLSD
LVSLVPLQLFTPQSTDLIIGSPSERRRFCDWGLFHVEHDFQTLANQYTKFLKHRNALLKQ
QASLTAPQNTYWEEKFAELGESLTSIRVSYIDKLTPLFKFYAEEFLPNFNVELSYYKGWE
KDVSLSESLVKKREYDGKIGHTSSGPHKADLRLKVNGVNAQELLSRGQLRMAVAALQMSQ
TKLFNSATQRKSIFLLDDVGAELDADKREQFIDGLLKMDTQVFVTAIESSQLAFIQKYNE
KKMFHVEHGSVKEE
NT seq 1125 nt   +upstreamnt  +downstreamnt
gtgcctatcgcttctttttatattcagcgtgatatcatgaaactggacaaagtccagatt
acccagttccgtaatctaacttccgtatcgttttctccttcgccgtcgttaactgttatt
gttggcgcgaatggaagtggtaagtcttcgctcatcgaagccctctattatttgggtttt
ggtcgctcgttcagaacaaataaacacagcgctgttatccaaaatgaaaaagataatttt
agtgttttcgcttcctgtaaagatgagttaggtgaagcgttaaagcttggctttcagcgt
aatagaaatgattcattcacttgcagcataaatggtgagcactccaataagctttctgat
ttggtcagtcttgttcctcttcaactttttacgcctcaaagtaccgatctcattattggc
tctccatcagaacgaagacgattttgtgattggggattgtttcacgtggaacatgatttc
caaactcttgcgaaccaatacactaaatttctaaaacaccgcaacgcgctattgaaacaa
caggcgagtcttacagcacctcaaaatacgtattgggaagaaaagttcgcagagttggga
gaatcgttaacctccatacgagttagttacatagataaacttactccattatttaaattt
tacgcggaagaatttcttccgaactttaatgttgaattaagttactataaggggtgggaa
aaagatgtttctttatcagaaagcctagttaaaaaacgtgagtatgatggtaaaatagga
catacctcttctgggccccataaagctgatctaaggcttaaagtgaatggggtgaatgcc
caggagcttttatcgagagggcagcttagaatggcagtagctgcgcttcaaatgtcacaa
accaagctatttaactctgcaacgcagcgtaaaagcatatttctacttgatgacgttggc
gctgaactagatgccgataaaagagaacaatttattgatgggttgcttaagatggatacg
caggttttcgttactgcaatagaatcctcgcaactcgcttttatacaaaaatacaacgaa
aagaaaatgtttcacgtggaacatggaagcgtgaaagaggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

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