KEGG T02720: I607

Alteromonas mediterranea U4: I607_00030

Entry

I607_00030        CDS       T02720

Symbol

glyS

Name

(GenBank) glycyl-tRNA ligase subunit beta

K01879

glycyl-tRNA synthetase beta chain [EC:6.1.1.14]

Organism

amal Alteromonas mediterranea U4

Pathway

amal00970

Aminoacyl-tRNA biosynthesis

Brite

KEGG Orthology (KO) [BR:amal00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    I607_00030 (glyS)
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:amal01007]
    I607_00030 (glyS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amal03016]
    I607_00030 (glyS)
Enzymes [BR:amal01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     I607_00030 (glyS)
Amino acid related enzymes [BR:amal01007]
Aminoacyl-tRNA synthetase
  Class II (C/G)
   I607_00030 (glyS)
Transfer RNA biogenesis [BR:amal03016]
Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    I607_00030 (glyS)

SSDB

Motif

Pfam:

tRNA_synt_2f DALR_1 DHNA

Other DBs

NCBI-ProteinID:

AGP83818

Position

complement(7203..9281)

AA seq 692 aa
MRTENCLVELGTEELPPKALKSLGEAFATQFEAALSQADLSFDSVSWFAAPRRLAVYVSG
LAEGQADKVVEKRGPAVSAAFDADGNPTKAAQGWARGNGIDVSDAERLVTDKGEWLLHKA
HVPGQTIAELLEGLINQAVSKLPIPKPMRWGNYNTQFIRPVHTLCVLYGSEVVNVSVLGL
TSGRVVQGHRFHGEGRFELDHADNYASALEKQYVLADFEARKDKVRQQLEDAAKNLSLKP
DYDEELLEEIASLVEWPVVLQAGFDKGFLEVPKEALIYTMKDDQKYVPLLDSDGALSNTF
LFVTNIESHDASQVISGNEKVIRPRLADAEFFFNSDKKTTLESRLESLETVLFQKQLGTL
KEKSERISALSAFIASQIDANETQAARAGLLAKTDLMSNMVMEFPDVQGVMGKYYALNDG
EDAPVAEALYEQYMPRFAGDALPSSGVSASVALADKLDTLVGIFGIGQLPKGDKDPFALR
RAAIGVLRIVTELSLPLDLETLVSKAIDVYGDKLTNAETQTQVVDFVLGRFNALLQDQAI
AIDVIQAVAARRPTKPSDYLARVHAVDKFKALEEAEALAAANKRVANILAKQNVEVTATV
NIDESLLAEDAEKALYVELKAAQKEVEIAVPSQDYTRILTTLATLRNVIDNFFDNVMVMA
DDEAVKHNRLALLSLLRQLFLTTADISILAKS

NT seq 2079 nt +upstreamnt +downstreamnt
gtgcgtactgaaaattgtttagttgaattaggtactgaagagttaccaccaaaagcactt
aagtctttgggcgaagccttcgccacacaatttgaagcagcacttagccaagctgactta
agctttgactcagttagctggtttgcagcccctcgccgcttagcggtttacgtttcaggt
cttgctgaaggtcaggctgacaaagtggttgaaaaacgcggcccagcagtatctgcggca
tttgacgctgatggcaaccccactaaggcagctcaaggttgggcacgcggtaacggtata
gacgtttctgacgcagagcgtttggttacggataaaggtgaatggcttcttcataaagca
catgtgcctggtcaaactattgctgagctgttagaagggttaattaaccaagcggtaagc
aagctacctattccaaagcctatgcgctggggtaactacaacactcagtttattcgccct
gtgcacaccctttgtgtgctttatggaagcgaagtggttaacgtttcagtattgggccta
acaagcggccgcgttgtacaaggtcatcgattccacggcgaaggtcgttttgagcttgat
catgctgacaactacgcctctgcattagagaaacaatatgtgttggcagattttgaagcg
cgtaaagataaagtacgccagcaacttgaagacgcagccaaaaacttatcgcttaagcca
gattacgacgaagaactgctggaagaaattgcttccctggtagagtggcctgtagtgctg
caagcaggattcgataagggtttcttagaagtgccgaaagaagcacttatctacacaatg
aaggacgaccagaagtatgtgccgctgcttgatagtgatggcgcactttctaacactttc
ttgtttgtgacgaatattgaaagccatgacgcatctcaagttatctcaggtaatgagaag
gttatccgccctcgccttgccgatgcagagttcttctttaacagcgataaaaagacaacg
ctagaaagccgccttgaaagcttagaaaccgtgttattccaaaagcagcttggaacgctt
aaagaaaagtctgaacgtatttctgccctatcggcgtttatcgcttcgcaaatagatgcg
aatgaaacacaagcagcacgagctggtcttctagctaaaaccgacttaatgtcgaacatg
gttatggagtttccagacgttcagggcgttatgggtaaatactatgcgttaaacgacggt
gaagatgcacctgttgctgaagcgctgtacgaacaatacatgccgcgttttgctggcgac
gcccttcctagttctggcgtaagcgcatcagtagcccttgctgacaaacttgatacacta
gttggtatattcggtattggccagctgccaaaaggtgataaagacccgtttgcacttcgt
cgtgcagctattggtgttctgcgtattgttaccgagctatcactgccattagaccttgaa
acgcttgtaagtaaagctattgacgtttacggcgataagttaacaaatgctgaaacacaa
acgcaggttgttgattttgtattaggtcgcttcaatgccctcctacaagatcaagctatc
gccattgatgttattcaagccgtagcagcccgtcgccctactaagccatctgattatcta
gctcgtgtccatgcggttgataaattcaaggcattagaagaggcagaggcgttagctgcc
gctaacaaacgcgtagcaaatattcttgctaagcagaacgtcgaagtaacagcaactgtc
aatattgatgaatcactgttggctgaagacgctgaaaaagcgctttacgttgagctaaaa
gccgcccagaaagaagtcgaaattgccgttccttcacaggactacacgcgtattcttacc
acgcttgcaaccttacgaaatgtaatcgataacttctttgataacgtaatggttatggca
gatgacgaagcagttaaacataaccgacttgctttgctatcgcttttaaggcaacttttc
cttactaccgcggacatctcaattctcgcgaagtcgtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF

DBGET integrated database retrieval system