KEGG   Alteromonas mediterranea U4: I607_08615
Entry
I607_08615        CDS       T02720                                 
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
amal  Alteromonas mediterranea U4
Pathway
amal00550  Peptidoglycan biosynthesis
amal01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:amal00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    I607_08615
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:amal01002]
    I607_08615
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:amal01011]
    I607_08615
Enzymes [BR:amal01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     I607_08615
Peptidases and inhibitors [BR:amal01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   I607_08615
Peptidoglycan biosynthesis and degradation proteins [BR:amal01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   I607_08615
SSDB
Motif
Pfam: Peptidase_S11 PBP5_C Beta-lactamase2 Peptidase_S13 Beta-lactamase
Other DBs
NCBI-ProteinID: AGP85518
Position
complement(1927500..1928684)
AA seq 394 aa
MLRIIQRAKPSLLSFAFLVLGTLLHTASAAVVTPPAPSVAAEGFLLTDYETGHVIASKNA
DMQLAPASLTKIMTIYVIGKELQAGNISLDDEVTISENAWAKKFPDSSKMFIEVGTQVSV
SDLLRGIVVQSGNDACVAMAEHVAGSESAFASMMNAHSASLGMTASHWVNAHGLHDPDHY
TTPRDMAILSRALIAETPEMYKIYSEKEFTYNGIKQYNRNSLLWDKSLNVDGIKTGHTSD
AGYSLITSAEQGGMRLISVVMGTDSERARKVENKKLLKYGFRFYETLTPYQAGHSFVAHR
IYMGDRETVDLGINQSTPITIPRGQAANLEANFELDDKLEAPLAKGQVVGKLYLQLEGED
VASYPLVTLQEVKEGSFFNRAKDYIMLQLGFDDE
NT seq 1185 nt   +upstreamnt  +downstreamnt
atgctcagaataattcaacgcgctaaaccgtcattactttcatttgcctttttggtgtta
gggacattgttacatacagccagtgctgctgtagtcactccgcctgctccatcagtcgct
gcagaaggtttcttacttaccgactatgaaacaggtcacgtcatcgcgtcgaaaaacgca
gatatgcagcttgcaccagcaagtttaacaaagatcatgaccatttatgtgattggtaaa
gaacttcaagcgggcaatattagcctagatgatgaagttaccatttctgaaaatgcatgg
gctaagaaattcccagattcttcaaaaatgtttattgaagtgggcacgcaagtttccgtt
agcgacctactgcgcggcattgtagtgcaatcaggtaacgatgcctgcgttgctatggct
gaacatgttgcaggttcggaatctgcatttgcaagcatgatgaacgctcacagcgcctcg
ttgggtatgacagcctctcattgggtaaatgctcacggattacatgatcctgaccactac
accacccctcgtgacatggctattctttctcgtgcacttattgccgagacacctgaaatg
tacaaaatttacagtgaaaaagaatttacctacaacggtattaaacagtacaaccgcaat
agcttactgtgggataaaagcttaaatgttgacggtatcaagacgggccacacctcagat
gcaggctacagcctaattacatctgctgagcaaggcggcatgcgcctaatttctgtggta
atgggtactgatagcgaacgtgcacgtaaagtagaaaacaaaaaactacttaaatacggc
ttccgcttttacgaaacgcttaccccttatcaagcgggacacagttttgtcgcccaccgc
atttacatgggtgatagagaaacggtagaccttggaattaatcaatctacccccattact
attcctcgcggtcaagcggcgaatttggaagctaactttgagttagacgacaaactggaa
gccccgctagctaaaggtcaagtagtcggtaagctatacctacagctagaaggtgaagac
gtggcaagttacccactggtaacccttcaagaagtaaaagaaggtagcttcttcaaccgc
gccaaagactacattatgcttcagctaggctttgacgacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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