KEGG   Acidianus manzaensis: B6F84_08610
Entry
B6F84_08610       CDS       T04836                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
aman  Acidianus manzaensis
Pathway
aman03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aman00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B6F84_08610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aman03019]
    B6F84_08610
   03009 Ribosome biogenesis [BR:aman03009]
    B6F84_08610
Messenger RNA biogenesis [BR:aman03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B6F84_08610
Ribosome biogenesis [BR:aman03009]
 Prokaryotic type
  rRNA helicases
   B6F84_08610
SSDB
Motif
Pfam: DEAD Helicase_C ResIII SecA_DEAD Flavi_DEAD
Other DBs
NCBI-ProteinID: ARM76077
UniProt: A0A1W6K0Q3
Position
1707950..1708999
AA seq 349 aa
MFKNLSEDLIKALNDANYVNPTKVQERAIPLLLQGKSVLAQAKTGSGKTAAYLIPAIERK
EHTLVLVPTRELAYQVKDEAKKLSKYSNVSIGVIIGGVSYSGQEKEGKSDIVIGTPGRIL
DLWGKGDLDLSDFSFAVVDEVDRMFDMGFIDDIKMILSHCNPNFYGFFSATVPEEIENLA
REFSPNIDFLQLDEYKPVEIDHLFVEVKGWRDKIEKLKNKVNDSNKSIIFVNTKKKAEEL
YDQISDYYDVSLLHGDLSQKERLRNLTSFRKGRTNILVSTDLASRGIDVIDVDEVINFDV
PRDVETYIHRVGRTGRMGRKGIAVTFYTRREILMINKIKELISKKIEIS
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgtttaaaaacttaagcgaagatttgattaaggcgttgaatgacgcaaattacgttaat
cctactaaagtccaagaaagggcaattcctttgcttttacaaggtaaaagcgtattagct
caagcaaaaacaggatcaggaaaaacagcagcgtatttgataccagcaatagaaaggaaa
gaacatactttagttttagttccaactagagaattagcatatcaagtaaaagatgaagct
aaaaaattaagcaaatattctaatgtttctattggcgtgataataggtggagtttcatat
tctggtcaagaaaaagagggtaaaagcgatatagttatagggactcctggaagaatactt
gatttatgggggaaaggagatttagatttatcagattttagttttgcggtggtcgatgaa
gtagatagaatgtttgatatgggattcatcgatgatattaaaatgatattaagccattgt
aatcctaatttttacggtttcttttcagctacagtaccagaagaaatagaaaatttagcc
agagaatttagcccaaatatagattttctacaattagatgaatataaaccagtggaaatt
gatcacttatttgtagaagtaaaaggttggagagataaaattgaaaaactaaaaaacaaa
gttaatgactctaataaatcaataatatttgtaaatactaagaaaaaagcagaggaatta
tatgatcaaatttctgattattacgatgtatcacttttacacggagatttatcacaaaaa
gagagattaaggaatttaacttcatttaggaaaggaagaacaaatattctagtatcaaca
gacttagcatctagaggaatagatgtgatagatgtagatgaagttataaattttgatgta
ccgagagatgtagaaacctatattcatagagtaggtagaacaggaagaatgggaagaaaa
ggtattgcagtaacattttacactagaagagaaatattaatgataaataaaattaaagaa
ttaataagtaaaaagatagagatatcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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