KEGG   Alteromonas macleodii Balearic Sea AD45: AMBAS45_06260Help
Entry
AMBAS45_06260     CDS       T02253                                 

Gene name
aspS
Definition
(GenBank) aspartyl-tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
amb  Alteromonas macleodii Balearic Sea AD45
Pathway
amb00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:amb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AMBAS45_06260 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:amb01007]
    AMBAS45_06260 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amb03016]
    AMBAS45_06260 (aspS)
   03029 Mitochondrial biogenesis [BR:amb03029]
    AMBAS45_06260 (aspS)
Enzymes [BR:amb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     AMBAS45_06260 (aspS)
Amino acid related enzymes [BR:amb01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AMBAS45_06260 (aspS)
Transfer RNA biogenesis [BR:amb03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AMBAS45_06260 (aspS)
 Prokaryotic type
   Other AARSs
    AMBAS45_06260 (aspS)
Mitochondrial biogenesis [BR:amb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AMBAS45_06260 (aspS)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID: AFT94730
UniProt: K0EGV3
Position
1468796..1470556
Genome map
AA seq 586 aa AA seqDB search
MRTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPDVLSVA
NTLRSEFCVKLTGKVRARPEGQVNKDMRTGEIEILGTGLEVINKSDVLPLDWNQENSEEQ
RLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVPS
RTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIETTFLD
ADGVMSITERMIRDLFNKMLNVDLGDFPRMTYKEAMTRFGSDKPDLRNPLELTDVADLLA
NVDFKVFSGPANDPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWIKVNDTGAG
LEGLQSPILKFLTEDITNAMLERTGAQSGDILLFGADSYTVVTEAMGALRLKLGEDFELL
EGEWKPLWVVDFPMFEEFDGQLHAIHHPFTAPRGLTPEELKANPAEALSDAYDMVLNGVE
LGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHAGLAFGLDRLVMLM
TGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKKQS
NT seq 1761 nt NT seq  +upstreamnt  +downstreamnt
atgcgcacagattactgtgggaatatcgattcatcatacattggacaagaagttaccctt
tgcgggtgggttaataagcgtcgcgatttaggcggtgtaattttcatcgacttacgcgac
cgcgaaggtatcgtacaagtggtgttcgacccagatttaccagacgtgctatcggtagct
aacacgttgcgtagcgaattctgtgtaaagctaacgggtaaagtgcgtgcgcgccctgaa
ggtcaagtaaataaagacatgcgcacaggtgagattgagatcctaggcacaggccttgaa
gtgatcaacaagtctgacgtgcttccactggactggaaccaagaaaactcagaagaacag
cgccttcgctatcgttatctagaccttcgccgtcctgtaatgagccagcgtttacagttc
cgtgcaaaagtaaccggtgctgtacgtcgtttcctagaagaagaaggtttccttgatatt
gaaacgcctattcttactaaagcaacgccagaaggtgcacgtgactacttagtgccaagc
cgcacccacaaaggtgagttctttgcacttccgcagtcgccacagcttttcaaacagctt
ctgatgatgtcgggcatggaccgttactatcaaattgttaagtgcttccgcgacgaagac
ttacgcgccgaccgtcagccagaatttacccaaatcgatattgagaccacgttcttagat
gccgatggcgtaatgtctattaccgagcgcatgatccgcgacttgttcaacaaaatgcta
aacgttgaccttggcgacttcccgcgcatgacgtacaaagaagccatgacgcgctttggt
agcgataagccagacctgcgtaacccgttagagttaacagacgttgccgacttgcttgct
aacgttgactttaaagtattcagcggcccggcaaacgaccctaaaggtcgcgttgcggca
attcgcgtaccaggcggtgcttcactttcgcgcaagcaaattgacgaatacaccaaattt
gtaggtatttacggcgcgaaaggcctagcttggatcaaagttaacgatactggtgcaggt
cttgaaggtctacagtcgccaatccttaaattcctaacggaagacatcactaacgccatg
ctagagcgcactggcgcacaaagcggcgatattttattgttcggtgcagacagctacact
gtggttaccgaagcgatgggcgcacttcgtcttaagcttggtgaagactttgagcttctt
gaaggcgagtggaaaccactttgggttgttgacttcccaatgttcgaagagtttgacggt
cagcttcacgctattcaccacccgtttaccgcgccacgtggtttaacgccagaagaactt
aaagctaacccagcagaagccttatctgacgcttacgatatggtattgaacggtgttgaa
ttaggcggtggttctgtacgtattcacaatgaagacatgcagtctacggtatttaacatt
cttggcattgacgatgaagaagcgaagaacaagtttggcttcttgcttgatgcgttgcgc
tttggtgcgccgccgcatgcaggtcttgcgtttggtctagaccgtcttgtaatgcttatg
actggcgcgacgtctatccgtgatgtgatggcgttccctaaaacgaccacagcggcatgt
ccgttaacatcggcgcctagccctgcaaacccacagcagcttgaagagctagctattgca
acggtgaaaaagcaatcgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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