KEGG   Alteromonas macleodii Balearic Sea AD45: AMBAS45_06260Help
Entry
AMBAS45_06260     CDS       T02253                                 

Gene name
aspS
Definition
(GenBank) aspartyl-tRNA ligase
  KO
K01876  aspartyl-tRNA synthetase [EC:6.1.1.12]
Organism
amb  Alteromonas macleodii Balearic Sea AD45
Pathway
amb00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:amb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AMBAS45_06260 (aspS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:amb01007]
    AMBAS45_06260 (aspS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amb03016]
    AMBAS45_06260 (aspS)
   03029 Mitochondrial biogenesis [BR:amb03029]
    AMBAS45_06260 (aspS)
Enzymes [BR:amb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.12  aspartate---tRNA ligase
     AMBAS45_06260 (aspS)
Amino acid related enzymes [BR:amb01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AMBAS45_06260 (aspS)
Transfer RNA biogenesis [BR:amb03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AMBAS45_06260 (aspS)
 Prokaryotic type
   Other AARSs
    AMBAS45_06260 (aspS)
Mitochondrial biogenesis [BR:amb03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    AMBAS45_06260 (aspS)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_2 GAD tRNA_anti-codon tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID: AFT94730
UniProt: K0EGV3
Position
1468796..1470556
Genome map
AA seq 586 aa AA seqDB search
MRTDYCGNIDSSYIGQEVTLCGWVNKRRDLGGVIFIDLRDREGIVQVVFDPDLPDVLSVA
NTLRSEFCVKLTGKVRARPEGQVNKDMRTGEIEILGTGLEVINKSDVLPLDWNQENSEEQ
RLRYRYLDLRRPVMSQRLQFRAKVTGAVRRFLEEEGFLDIETPILTKATPEGARDYLVPS
RTHKGEFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIETTFLD
ADGVMSITERMIRDLFNKMLNVDLGDFPRMTYKEAMTRFGSDKPDLRNPLELTDVADLLA
NVDFKVFSGPANDPKGRVAAIRVPGGASLSRKQIDEYTKFVGIYGAKGLAWIKVNDTGAG
LEGLQSPILKFLTEDITNAMLERTGAQSGDILLFGADSYTVVTEAMGALRLKLGEDFELL
EGEWKPLWVVDFPMFEEFDGQLHAIHHPFTAPRGLTPEELKANPAEALSDAYDMVLNGVE
LGGGSVRIHNEDMQSTVFNILGIDDEEAKNKFGFLLDALRFGAPPHAGLAFGLDRLVMLM
TGATSIRDVMAFPKTTTAACPLTSAPSPANPQQLEELAIATVKKQS
NT seq 1761 nt NT seq  +upstreamnt  +downstreamnt
atgcgcacagattactgtgggaatatcgattcatcatacattggacaagaagttaccctt
tgcgggtgggttaataagcgtcgcgatttaggcggtgtaattttcatcgacttacgcgac
cgcgaaggtatcgtacaagtggtgttcgacccagatttaccagacgtgctatcggtagct
aacacgttgcgtagcgaattctgtgtaaagctaacgggtaaagtgcgtgcgcgccctgaa
ggtcaagtaaataaagacatgcgcacaggtgagattgagatcctaggcacaggccttgaa
gtgatcaacaagtctgacgtgcttccactggactggaaccaagaaaactcagaagaacag
cgccttcgctatcgttatctagaccttcgccgtcctgtaatgagccagcgtttacagttc
cgtgcaaaagtaaccggtgctgtacgtcgtttcctagaagaagaaggtttccttgatatt
gaaacgcctattcttactaaagcaacgccagaaggtgcacgtgactacttagtgccaagc
cgcacccacaaaggtgagttctttgcacttccgcagtcgccacagcttttcaaacagctt
ctgatgatgtcgggcatggaccgttactatcaaattgttaagtgcttccgcgacgaagac
ttacgcgccgaccgtcagccagaatttacccaaatcgatattgagaccacgttcttagat
gccgatggcgtaatgtctattaccgagcgcatgatccgcgacttgttcaacaaaatgcta
aacgttgaccttggcgacttcccgcgcatgacgtacaaagaagccatgacgcgctttggt
agcgataagccagacctgcgtaacccgttagagttaacagacgttgccgacttgcttgct
aacgttgactttaaagtattcagcggcccggcaaacgaccctaaaggtcgcgttgcggca
attcgcgtaccaggcggtgcttcactttcgcgcaagcaaattgacgaatacaccaaattt
gtaggtatttacggcgcgaaaggcctagcttggatcaaagttaacgatactggtgcaggt
cttgaaggtctacagtcgccaatccttaaattcctaacggaagacatcactaacgccatg
ctagagcgcactggcgcacaaagcggcgatattttattgttcggtgcagacagctacact
gtggttaccgaagcgatgggcgcacttcgtcttaagcttggtgaagactttgagcttctt
gaaggcgagtggaaaccactttgggttgttgacttcccaatgttcgaagagtttgacggt
cagcttcacgctattcaccacccgtttaccgcgccacgtggtttaacgccagaagaactt
aaagctaacccagcagaagccttatctgacgcttacgatatggtattgaacggtgttgaa
ttaggcggtggttctgtacgtattcacaatgaagacatgcagtctacggtatttaacatt
cttggcattgacgatgaagaagcgaagaacaagtttggcttcttgcttgatgcgttgcgc
tttggtgcgccgccgcatgcaggtcttgcgtttggtctagaccgtcttgtaatgcttatg
actggcgcgacgtctatccgtgatgtgatggcgttccctaaaacgaccacagcggcatgt
ccgttaacatcggcgcctagccctgcaaacccacagcagcttgaagagctagctattgca
acggtgaaaaagcaatcgtaa

DBGET integrated database retrieval system