KEGG   Alteromonas macleodii Balearic Sea AD45: AMBAS45_09080
Entry
AMBAS45_09080     CDS       T02253                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
amb  Alteromonas macleodii Balearic Sea AD45
Brite
KEGG Orthology (KO) [BR:amb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amb03009]
    AMBAS45_09080
Enzymes [BR:amb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     AMBAS45_09080
Ribosome biogenesis [BR:amb03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AMBAS45_09080
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AFT95287
Position
complement(2149351..2149893)
AA seq 180 aa
MSSNAKVVLFNKPFQVLSQFTDADGRETLKDYIDVPGVYAAGRLDRDSEGLLVLTNDGKL
QHKLANPKAKTSKTYWVQVEGIMDEKAMQALRDGVELKDGMTRPAKVKAMEAPSVWPRNP
PVRFRQSIPTSWVEITITEGRNRQVRRMTAHVGYPTLRLIRYRVGSWTIDGIDNGSYVHF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtcttcaaacgctaaagtggtgctttttaataagccctttcaagttctttctcaattt
actgatgcagacggtagagaaaccctaaaggactatattgatgttcccggtgtgtatgcc
gcaggacgactcgacagagattcggaaggtcttctcgtactcaccaatgacggaaagctt
cagcataaacttgctaacccaaaagctaaaaccagcaaaacctattgggtgcaagttgaa
ggtattatggacgaaaaagcaatgcaggcgctgcgtgacggcgtagaattaaaagatgga
atgactcgccccgccaaagtaaaggccatggaagcacctagcgtgtggccgcggaatccg
cccgtacgctttagacagtcgatccctactagctgggtagaaattaccattacagaaggc
agaaacagacaagtgcgacgtatgacggcgcacgtcggctaccccacccttcggctcatc
agatatcgcgtgggtagttggaccattgatggtattgataatggcagctacgttcacttt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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