KEGG   Alteromonas mediterranea DE: MADE_1012360
Entry
MADE_1012360      CDS       T00747                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
amc  Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:amc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amc03021]
    MADE_1012360
Transcription machinery [BR:amc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MADE_1012360
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF GerE F_actin_cap_B HTH_24 APOBEC_N
Other DBs
NCBI-ProteinID: AEA98608
UniProt: F2G6X4
Position
complement(2857219..2857830)
AA seq 203 aa
MLVGIPLEQSNSTIKPKECATEMSDYLVAVADARCKRSFARVFNYFAPRLRSYALKQMGN
EALAMELVQDTMSNVWQKAHLFNAEKGSPSTWIFTIARNIRFDMLRKLQNRKEDVCSDDL
WPVLCEQTADVNEAPLDEQVTLEQIGYMFESLPVKQKAVVEAIYIDGKSQQEVADELSIP
LGTVKSRTRLALQRLKVMLNDND
NT seq 612 nt   +upstreamnt  +downstreamnt
atgttagttggaattcctttggaacaaagtaacagcacaatcaaacctaaagagtgtgct
actgaaatgtctgattacctagtcgcggttgcagatgctcgatgcaagcgttcatttgct
cgagtgttcaactattttgccccacgtttgcgctcttatgcccttaagcagatggggaac
gaagcactagcaatggagcttgtacaagacaccatgtcaaacgtttggcaaaaagcgcat
ttgtttaatgctgagaaaggctcgccttctacgtggattttcactattgcacgtaacata
cggtttgacatgttacgcaagcttcaaaatagaaaagaggacgtgtgctctgacgacctg
tggcctgtgttatgtgagcagacggcagatgtgaatgaggcgccacttgacgagcaagta
actctagagcaaattggctatatgtttgaatcacttccggttaaacaaaaggcggtggta
gaagctatctatattgatggcaaatctcagcaagaagtcgctgacgaactttctattccc
ttaggtacagtaaagtcaagaactcgcttagcgcttcaacgattaaaggtcatgttaaac
gataatgattag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (68)   
   KEGG ORTHOLOGY (1)   
   RefGene (65)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (80)   

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