KEGG   Alteromonas mediterranea DE: MADE_1019735
Entry
MADE_1019735      CDS       T00747                                 
Symbol
fis
Name
(GenBank) Fis family transcriptional regulator
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
amc  Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:amc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amc03000]
    MADE_1019735 (fis)
   03036 Chromosome and associated proteins [BR:amc03036]
    MADE_1019735 (fis)
   03400 DNA repair and recombination proteins [BR:amc03400]
    MADE_1019735 (fis)
Transcription factors [BR:amc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    MADE_1019735 (fis)
Chromosome and associated proteins [BR:amc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    MADE_1019735 (fis)
DNA repair and recombination proteins [BR:amc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      MADE_1019735 (fis)
SSDB
Motif
Pfam: HTH_8 DUF5805 DCAF17 Phage_NinH EnY2 HTH_28 DUF2106
Other DBs
NCBI-ProteinID: AEB00070
UniProt: F2GBJ3
Position
4309291..4309584
AA seq 97 aa
MFDQNVTSPFTTTVTTPSQTQAQKPLRDSVKQAVNKYLKQLDNANIDNLYEMVLAEVEAP
LLEEVMTYTRGNQTRAAIMMGINRGTLRKKLKQYGMN
NT seq 294 nt   +upstreamnt  +downstreamnt
atgttcgatcaaaacgtgacttcaccttttactacgacagtaactacgccttcacaaacg
caagcgcaaaagccattgcgtgactctgtaaagcaagcggttaacaagtacctaaagcaa
ttagataacgcaaacatcgacaacctgtacgaaatggtactggctgaagtagaagcgccg
cttctagaagaagtcatgacttacactcgcggcaaccaaacacgcgccgctatcatgatg
ggcatcaaccgtggcacacttcgcaagaagcttaagcaatacggcatgaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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